Microbial community composition associated with Periphylla periphylla exposed to sediment plumes and increasing temperatures

doi:doi:10.1594/PANGAEA.957395

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Microbial community composition associated with Periphylla periphylla exposed to sediment plumes and increasing temperatures

This dataset comprises the microbial community composition associated with the outer bell of the deep pelagic jellyfish Periphylla periphylla exposed to anthropogenic disturbance. Specifically, we tested the effects of ocean warming and sediment plumes from deep-sea mining during ex situ experiments, using Periphylla collected in the Lurefjord and Sognefjord, Norway, in 2021. Microbial community composition is given in raw counts for each amplicon sequence variant (ASV) encountered, based on 16S rRNA sequencing. Taxonomy for each ASV is listed, including Kingdom, Phylum, Class, Order, Family, Genus and Species, which were assigned using QIIME2 and the Silva 132 99% OTUs 16S rRNA database (Quast et al. 2013).

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Cite this as

Stenvers, Vanessa, Hauss, Helena, Schmittmann, Lara, Bayer, Till, Havermans, Charlotte, Hentschel, Ute, Sweetman, Andrew K, Hoving, Henk-Jan T (2023). Dataset: Microbial community composition associated with Periphylla periphylla exposed to sediment plumes and increasing temperatures. https://doi.org/10.1594/PANGAEA.957395

DOI retrieved: 2023

Additional Info

Field	Value
Imported on	November 30, 2024
Last update	November 30, 2024
License	CC-BY-4.0
Source	https://doi.org/10.1594/PANGAEA.957395
Author	Stenvers, Vanessa
Given Name	Vanessa
Family Name	Stenvers
More Authors	Hauss, Helena Schmittmann, Lara Bayer, Till Havermans, Charlotte Hentschel, Ute Sweetman, Andrew K Hoving, Henk-Jan T
Source Creation	2023
Publication Year	2023
Resource Type	text/tab-separated-values - filename: Stenvers-etal_2023_Microbiome
Subject Areas	Name: BiologicalClassification
Related Identifiers	Title: Experimental mining plumes and ocean warming trigger stress in a deep pelagic jellyfish Identifier: https://doi.org/10.1038/s41467-023-43023-6 Type: DOI Relation: References Year: 2023 Source: Nature Communications Authors: Stenvers Vanessa , Hauss Helena , Bayer Till , Havermans Charlotte , Hentschel Ute , Schmittmann Lara , Sweetman Andrew K , Hoving Henk-Jan T , Stenvers Vanessa , Hauss Helena , Schmittmann Lara , Bayer Till , Havermans Charlotte , Hentschel Ute , Sweetman Andrew K , Hoving Henk-Jan T , Stenvers Vanessa , Hauss Helena , Schmittmann Lara , Bayer Till , Havermans Charlotte , Hentschel Ute , Sweetman Andrew K , Hoving Henk-Jan T , Quast Christian , Pruesse Elmar , Yilmaz Pelin , Gerken Jan , Schweer Timmy , Yarza Pablo , Peplies J , Glöckner Frank Oliver . Title: Physiological and behavioural responses of the deep pelagic jellyfish Periphylla periphylla exposed to sediment plumes and increasing temperatures Identifier: https://doi.org/10.1594/PANGAEA.957367 Type: DOI Relation: References Year: 2023 Authors: Stenvers Vanessa , Hauss Helena , Bayer Till , Havermans Charlotte , Hentschel Ute , Schmittmann Lara , Sweetman Andrew K , Hoving Henk-Jan T , Stenvers Vanessa , Hauss Helena , Schmittmann Lara , Bayer Till , Havermans Charlotte , Hentschel Ute , Sweetman Andrew K , Hoving Henk-Jan T , Stenvers Vanessa , Hauss Helena , Schmittmann Lara , Bayer Till , Havermans Charlotte , Hentschel Ute , Sweetman Andrew K , Hoving Henk-Jan T , Quast Christian , Pruesse Elmar , Yilmaz Pelin , Gerken Jan , Schweer Timmy , Yarza Pablo , Peplies J , Glöckner Frank Oliver . Title: Transcriptome expression in Periphylla periphylla exposed to sediment plumes and increasing temperatures Identifier: https://doi.org/10.1594/PANGAEA.962217 Type: DOI Relation: References Year: 2023 Authors: Stenvers Vanessa , Hauss Helena , Bayer Till , Havermans Charlotte , Hentschel Ute , Schmittmann Lara , Sweetman Andrew K , Hoving Henk-Jan T , Stenvers Vanessa , Hauss Helena , Schmittmann Lara , Bayer Till , Havermans Charlotte , Hentschel Ute , Sweetman Andrew K , Hoving Henk-Jan T , Stenvers Vanessa , Hauss Helena , Schmittmann Lara , Bayer Till , Havermans Charlotte , Hentschel Ute , Sweetman Andrew K , Hoving Henk-Jan T , Quast Christian , Pruesse Elmar , Yilmaz Pelin , Gerken Jan , Schweer Timmy , Yarza Pablo , Peplies J , Glöckner Frank Oliver . Title: The SILVA ribosomal RNA gene database project: improved data processing and web-based tools Identifier: https://doi.org/10.1093/nar/gks1219 Type: DOI Relation: References Year: 2012 Source: Nucleic Acids Research Authors: Stenvers Vanessa , Hauss Helena , Bayer Till , Havermans Charlotte , Hentschel Ute , Schmittmann Lara , Sweetman Andrew K , Hoving Henk-Jan T , Stenvers Vanessa , Hauss Helena , Schmittmann Lara , Bayer Till , Havermans Charlotte , Hentschel Ute , Sweetman Andrew K , Hoving Henk-Jan T , Stenvers Vanessa , Hauss Helena , Schmittmann Lara , Bayer Till , Havermans Charlotte , Hentschel Ute , Sweetman Andrew K , Hoving Henk-Jan T , Quast Christian , Pruesse Elmar , Yilmaz Pelin , Gerken Jan , Schweer Timmy , Yarza Pablo , Peplies J , Glöckner Frank Oliver .