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List of number of microsatellite repeats for fungus specific locus in stands of Cetraria aculeata, Usnea antarctica and U. aurantiacoatra

Eight consistently amplifying markers were used for Cetraria aculeata. Samples of Usnea aurantiacoatra and U. antarctica were genotyped using 21 and 22 microsatellites markers, respectively. Detailed information on primers and PCR amplification can be found in Lutsak et al. (2016) and Lagostina et al. (2017). PCR amplicons were electrophoresed using an Applied Biosystems 3730 sequencer, with the LIZ 500 (C. aculeata)or LIZ 600 (Usnea sp.) size standards (Applied Biosystems, Waltham, Mass., USA). Allele sizes were manually scored using the Geneious 10 microsatellites tool (Kearse et al. 2012). Those SSR markers were used to study the effects of dispersal strategy and phylogeographic history on the population genetic structure of Antarctic lichens.

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Cite this as

Lagostina, Elisa (2019). Dataset: List of number of microsatellite repeats for fungus specific locus in stands of Cetraria aculeata, Usnea antarctica and U. aurantiacoatra. https://doi.org/10.1594/PANGAEA.906884

DOI retrieved: 2019

Additional Info

Field Value
Imported on November 30, 2024
Last update November 30, 2024
License CC-BY-4.0
Source https://doi.org/10.1594/PANGAEA.906884
Author Lagostina, Elisa
Given Name Elisa
Family Name Lagostina
Source Creation 2019
Publication Year 2019
Resource Type application/zip - filename: Lagostina-etal_2019
Subject Areas
Name: Ecology

Name: LandSurface

Related Identifiers
Title: Genetic structure and gene flow of three lichens forming fungi in the Maritime Antarctic and southern South America
Type: DOI
Relation: IsSupplementTo
Source: Journal of Biogeography
Authors: Lagostina Elisa , Dal Grande Francesco , Scur M , Lorenz Aline , Andreev M , Ruprecht U , Søchting U , Sancho L G , Wirtz Nora , Rozzi R , Printzen Christian .