5 datasets found

Tags: protein-protein interactions

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  • Protein Structure Data from PDB

    The dataset used in this study is a collection of protein structure data from the Protein Data Bank (PDB), which is used to infer the interactions between protein subunits.

  • SARS-CoV-2 RBD binding affinity dataset

    The dataset used in the paper for predicting the effects of mutations on protein-protein binding.

  • SKEMPI2 dataset

    The dataset used in the paper for predicting mutational effects on protein-protein binding.

  • BioGRID

    The dataset used for training the PPI transformer network, containing 31,869 experimentally-validated positive virus-human interactions and 34,836 negative interactions.

  • DrugBank

    The dataset used in the paper is a sparse user-item interaction matrix, a protein-protein similarity matrix, and a drug-drug similarity matrix.
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