Isolation and untargeted metabolomics of microorganisms from the mesopelagic jellyfish Periphylla periphylla

This study aimed at isolating microorganisms associated with the mesopelagic jellyfish Periphylla periphylla collected in Irminger Sea at a depth of 325 m in July 2020. Three different solid cultivation media; Hastings, Marine agar and Wickerham media were used for the isolation of the associated microorganisms. A total of 43 bacteria were isolated from the inner and outer surfaces of the umbrella of P. periphylla, but unfortunately, no fungal strain was isolated. Isolates were further identified by Sanger sequencing of the 16S rRNA gene, and based on phylogenetic distinctiveness (differences in closest relative species according to the nucleotide BLAST), 16 bacteria belonging to 8 different genera were selected and subjected to an OSMAC cultivation regime approach using liquid and solid marine broth and glucose– yeast–malt media. After 7 days of cultivation, cultures were extracted with ethyl acetate and assessed for antimicrobial activity against fish and human pathogens. Based on antimicrobial activity assessment, four most bioactive strains; Polaribacter sp. SU124, Shewanella sp. SU126, Psychrobacter sp. SU143 and Psychrobacter sp. SU137, were prioritized for a comparative and untargeted metabolomics analysis using feature-based molecular networking. These findings highlight the biotechnological potential of P. periphylla-associated microbiota.

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Cite this as

Oppong-Danquah, Ernest, Miranda, Martina, Blümel, Martina, Tasdemir, Deniz (2023). Dataset: Isolation and untargeted metabolomics of microorganisms from the mesopelagic jellyfish Periphylla periphylla. https://doi.org/10.1594/PANGAEA.959939

DOI retrieved: 2023

Additional Info

Field Value
Imported on December 1, 2024
Last update December 1, 2024
License CC-BY-4.0
Source https://doi.org/10.1594/PANGAEA.959939
Author Oppong-Danquah, Ernest
Given Name Ernest
Family Name Oppong-Danquah
More Authors
Miranda, Martina
Blümel, Martina
Tasdemir, Deniz
Source Creation 2023
Publication Year 2023
Resource Type application/zip - filename: Oppong-Danquah-etal_2023
Subject Areas
Name: Chemistry

Related Identifiers
Title: Bioactivity Profiling and Untargeted Metabolomics of Microbiota Associated with Mesopelagic Jellyfish Periphylla Periphylla
Identifier: https://doi.org/10.3390/md21020129
Type: DOI
Relation: References
Year: 2023
Source: Marine Drugs
Authors: Oppong-Danquah Ernest , Miranda Martina , Blümel Martina , Tasdemir Deniz .