Changes
On November 30, 2024 at 10:40:59 AM UTC, admin:
-
Moved Seawater carbonate chemistry and phytoplankton and eubacterial community compositions in the northwest subarctic Pacific from organization PANGAEA (Biosphere) to organization PANGAEA (Ecology)
-
Removed the following tags from Seawater carbonate chemistry and phytoplankton and eubacterial community compositions in the northwest subarctic Pacific
-
Added the following tags to Seawater carbonate chemistry and phytoplankton and eubacterial community compositions in the northwest subarctic Pacific
f | 1 | { | f | 1 | { |
2 | "author": "Endo, H", | 2 | "author": "Endo, H", | ||
3 | "author_email": "", | 3 | "author_email": "", | ||
4 | "citation": [], | 4 | "citation": [], | ||
5 | "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700", | 5 | "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700", | ||
6 | "doi": "10.1594/PANGAEA.820333", | 6 | "doi": "10.1594/PANGAEA.820333", | ||
7 | "doi_date_published": "2013", | 7 | "doi_date_published": "2013", | ||
8 | "doi_publisher": "", | 8 | "doi_publisher": "", | ||
9 | "doi_status": "True", | 9 | "doi_status": "True", | ||
10 | "extra_authors": [ | 10 | "extra_authors": [ | ||
11 | { | 11 | { | ||
12 | "extra_author": "Yoshimura, T", | 12 | "extra_author": "Yoshimura, T", | ||
13 | "familyName": "Yoshimura", | 13 | "familyName": "Yoshimura", | ||
14 | "givenName": "T", | 14 | "givenName": "T", | ||
15 | "orcid": "0000-0001-5700-2590" | 15 | "orcid": "0000-0001-5700-2590" | ||
16 | }, | 16 | }, | ||
17 | { | 17 | { | ||
18 | "extra_author": "Kataoka, Takafumi", | 18 | "extra_author": "Kataoka, Takafumi", | ||
19 | "familyName": "Kataoka", | 19 | "familyName": "Kataoka", | ||
20 | "givenName": "Takafumi", | 20 | "givenName": "Takafumi", | ||
21 | "orcid": "" | 21 | "orcid": "" | ||
22 | }, | 22 | }, | ||
23 | { | 23 | { | ||
24 | "extra_author": "Suzuki, Koji", | 24 | "extra_author": "Suzuki, Koji", | ||
25 | "familyName": "Suzuki", | 25 | "familyName": "Suzuki", | ||
26 | "givenName": "Koji", | 26 | "givenName": "Koji", | ||
27 | "orcid": "0000-0001-5354-1044" | 27 | "orcid": "0000-0001-5354-1044" | ||
28 | } | 28 | } | ||
29 | ], | 29 | ], | ||
30 | "familyName": "Endo", | 30 | "familyName": "Endo", | ||
31 | "givenName": "H", | 31 | "givenName": "H", | ||
32 | "groups": [], | 32 | "groups": [], | ||
33 | "id": "cd8deaac-e6ff-4ffa-bc99-6772a11d7873", | 33 | "id": "cd8deaac-e6ff-4ffa-bc99-6772a11d7873", | ||
34 | "isopen": false, | 34 | "isopen": false, | ||
35 | "license_id": "CC-BY-3.0", | 35 | "license_id": "CC-BY-3.0", | ||
36 | "license_title": "CC-BY-3.0", | 36 | "license_title": "CC-BY-3.0", | ||
37 | "metadata_created": "2024-11-29T11:34:39.608622", | 37 | "metadata_created": "2024-11-29T11:34:39.608622", | ||
n | 38 | "metadata_modified": "2024-11-29T11:34:39.608629", | n | 38 | "metadata_modified": "2024-11-30T10:40:59.606048", |
39 | "name": "png-doi-10-1594-pangaea-820333", | 39 | "name": "png-doi-10-1594-pangaea-820333", | ||
40 | "notes": "On-deck CO2-Fe-manipulated incubation experiments were | 40 | "notes": "On-deck CO2-Fe-manipulated incubation experiments were | ||
41 | conducted using surface seawater collected from the Western Subarctic | 41 | conducted using surface seawater collected from the Western Subarctic | ||
42 | Gyre of the NW Pacific in the summer of 2008 to elucidate the impacts | 42 | Gyre of the NW Pacific in the summer of 2008 to elucidate the impacts | ||
43 | of ocean acidification and Fe enrichment on the abundance and | 43 | of ocean acidification and Fe enrichment on the abundance and | ||
44 | community composition of phytoplankton and eubacteria in the study | 44 | community composition of phytoplankton and eubacteria in the study | ||
45 | area. During the incubation, excluding the initial period, the mean | 45 | area. During the incubation, excluding the initial period, the mean | ||
46 | partial pressures of CO2 in non-Fe-added bottles were 230, 419, 843, | 46 | partial pressures of CO2 in non-Fe-added bottles were 230, 419, 843, | ||
47 | and 1124 \u00b5atm, whereas those in Fe-added treatments were 152, | 47 | and 1124 \u00b5atm, whereas those in Fe-added treatments were 152, | ||
48 | 394, 791, and 1008 \u00b5atm. Changes in the abundance and community | 48 | 394, 791, and 1008 \u00b5atm. Changes in the abundance and community | ||
49 | composition of phytoplankton were estimated using HPLC pigment | 49 | composition of phytoplankton were estimated using HPLC pigment | ||
50 | signatures with the program CHEMTAX and flow cytometry. A DGGE | 50 | signatures with the program CHEMTAX and flow cytometry. A DGGE | ||
51 | fingerprint technique targeting 16S rRNA gene fragments was also used | 51 | fingerprint technique targeting 16S rRNA gene fragments was also used | ||
52 | to estimate changes in eubacterial phylotypes during incubation. The | 52 | to estimate changes in eubacterial phylotypes during incubation. The | ||
53 | Fe addition induced diatom blooms, and subsequently stimulated the | 53 | Fe addition induced diatom blooms, and subsequently stimulated the | ||
54 | growth of heterotrophic bacteria such as Roseobacter, Phaeobacter, and | 54 | growth of heterotrophic bacteria such as Roseobacter, Phaeobacter, and | ||
55 | Alteromonas in the post-bloom phase. In both the Fe-limited and | 55 | Alteromonas in the post-bloom phase. In both the Fe-limited and | ||
56 | Fe-replete treatments, concentrations of 19'-hexanoyloxyfucoxanthin, a | 56 | Fe-replete treatments, concentrations of 19'-hexanoyloxyfucoxanthin, a | ||
57 | haptophyte marker, and the cell abundance of coccolithophores | 57 | haptophyte marker, and the cell abundance of coccolithophores | ||
58 | decreased at higher CO2 levels (750 and 1000 ppm), whereas diatoms | 58 | decreased at higher CO2 levels (750 and 1000 ppm), whereas diatoms | ||
59 | exhibited little response to the changes in CO2 availability. The | 59 | exhibited little response to the changes in CO2 availability. The | ||
60 | abundances of Synechococcus and small eukaryotic phytoplankton (<10 | 60 | abundances of Synechococcus and small eukaryotic phytoplankton (<10 | ||
61 | \u00b5m) increased at the higher CO2 levels. DGGE band positions | 61 | \u00b5m) increased at the higher CO2 levels. DGGE band positions | ||
62 | revealed that Methylobacterium of Alphaproteobacteria occurred solely | 62 | revealed that Methylobacterium of Alphaproteobacteria occurred solely | ||
63 | at lower CO2 levels (180 and 380 ppm) during the post-bloom phase. | 63 | at lower CO2 levels (180 and 380 ppm) during the post-bloom phase. | ||
64 | These results suggest that increases in CO2 level could affect not | 64 | These results suggest that increases in CO2 level could affect not | ||
65 | only the community composition of phytoplankton but also that of | 65 | only the community composition of phytoplankton but also that of | ||
66 | eubacteria. As these microorganisms play critical roles in the | 66 | eubacteria. As these microorganisms play critical roles in the | ||
67 | biological carbon pump and microbial loop, our results indicate that | 67 | biological carbon pump and microbial loop, our results indicate that | ||
68 | the progression of ocean acidification can alter the biogeochemical | 68 | the progression of ocean acidification can alter the biogeochemical | ||
69 | processes in the study area.", | 69 | processes in the study area.", | ||
70 | "num_resources": 0, | 70 | "num_resources": 0, | ||
n | 71 | "num_tags": 10, | n | 71 | "num_tags": 13, |
72 | "orcid": "0000-0003-0016-1624", | 72 | "orcid": "0000-0003-0016-1624", | ||
73 | "organization": { | 73 | "organization": { | ||
74 | "approval_status": "approved", | 74 | "approval_status": "approved", | ||
n | 75 | "created": "2024-11-29T11:32:00.143130", | n | 75 | "created": "2024-11-30T10:25:26.439072", |
76 | "description": "PANGAEA (Data Publisher for Earth & Environmental | 76 | "description": "PANGAEA (Data Publisher for Earth & Environmental | ||
77 | Science): The information system PANGAEA is operated as an Open Access | 77 | Science): The information system PANGAEA is operated as an Open Access | ||
78 | library aimed at archiving, publishing and distributing georeferenced | 78 | library aimed at archiving, publishing and distributing georeferenced | ||
79 | data from earth system research. PANGAEA guarantees long-term | 79 | data from earth system research. PANGAEA guarantees long-term | ||
80 | availability (greater than 10 years) of its content. PANGAEA is open | 80 | availability (greater than 10 years) of its content. PANGAEA is open | ||
81 | to any project, institution, or individual scientist to use or to | 81 | to any project, institution, or individual scientist to use or to | ||
82 | archive and publish data. PANGAEA focuses on georeferenced | 82 | archive and publish data. PANGAEA focuses on georeferenced | ||
83 | observational data, experimental data, and models/simulations. | 83 | observational data, experimental data, and models/simulations. | ||
84 | Citability, comprehensive metadata descriptions, interoperability of | 84 | Citability, comprehensive metadata descriptions, interoperability of | ||
85 | data and metadata, a high degree of structural and semantic | 85 | data and metadata, a high degree of structural and semantic | ||
86 | harmonization of the data inventory as well as the commitment of the | 86 | harmonization of the data inventory as well as the commitment of the | ||
87 | hosting institutions ensures FAIRness of archived data.", | 87 | hosting institutions ensures FAIRness of archived data.", | ||
n | 88 | "id": "3226ef9c-20d1-43fd-ba8f-fa35c8c9fb5d", | n | 88 | "id": "c2816fc6-b5ce-42c9-b5a4-11709b658b82", |
89 | "image_url": "pangaea_topicbiosphere.png", | 89 | "image_url": "pangaea_topicecology.png", | ||
90 | "is_organization": true, | 90 | "is_organization": true, | ||
n | 91 | "name": "pangaea_biosphere", | n | 91 | "name": "pangaea_ecology", |
92 | "state": "active", | 92 | "state": "active", | ||
n | 93 | "title": "PANGAEA (Biosphere)", | n | 93 | "title": "PANGAEA (Ecology)", |
94 | "type": "organization" | 94 | "type": "organization" | ||
95 | }, | 95 | }, | ||
n | 96 | "owner_org": "3226ef9c-20d1-43fd-ba8f-fa35c8c9fb5d", | n | 96 | "owner_org": "c2816fc6-b5ce-42c9-b5a4-11709b658b82", |
97 | "private": false, | 97 | "private": false, | ||
98 | "publication_year": "2013", | 98 | "publication_year": "2013", | ||
99 | "related_identifiers": [ | 99 | "related_identifiers": [ | ||
100 | { | 100 | { | ||
101 | "authors": "Endo H,Yoshimura T,Kataoka Takafumi,Suzuki Koji", | 101 | "authors": "Endo H,Yoshimura T,Kataoka Takafumi,Suzuki Koji", | ||
102 | "email_authors": | 102 | "email_authors": | ||
103 | "endo@ees.hokudai.ac.jp,ytakeshi@criepi.denken.or.jp,,", | 103 | "endo@ees.hokudai.ac.jp,ytakeshi@criepi.denken.or.jp,,", | ||
104 | "identifier": "https://doi.org/10.1016/j.jembe.2012.11.003", | 104 | "identifier": "https://doi.org/10.1016/j.jembe.2012.11.003", | ||
105 | "identifier_type": "DOI", | 105 | "identifier_type": "DOI", | ||
106 | "orcid_authors": | 106 | "orcid_authors": | ||
107 | "0000-0003-0016-1624,0000-0001-5700-2590,,0000-0001-5354-1044", | 107 | "0000-0003-0016-1624,0000-0001-5700-2590,,0000-0001-5354-1044", | ||
108 | "relation_type": "IsSupplementTo", | 108 | "relation_type": "IsSupplementTo", | ||
109 | "source": "Journal of Experimental Marine Biology and Ecology", | 109 | "source": "Journal of Experimental Marine Biology and Ecology", | ||
110 | "title": "Effects of CO2 and iron availability on phytoplankton | 110 | "title": "Effects of CO2 and iron availability on phytoplankton | ||
111 | and eubacterial community compositions in the northwest subarctic | 111 | and eubacterial community compositions in the northwest subarctic | ||
112 | Pacific", | 112 | Pacific", | ||
113 | "year": "2013" | 113 | "year": "2013" | ||
114 | }, | 114 | }, | ||
115 | { | 115 | { | ||
116 | "authors": "Lavigne H\u00e9lo\u00efse,Gattuso Jean-Pierre", | 116 | "authors": "Lavigne H\u00e9lo\u00efse,Gattuso Jean-Pierre", | ||
117 | "email_authors": | 117 | "email_authors": | ||
118 | "hlavigne@naturalsciences.be,jean-pierre.gattuso@imev-mer.fr", | 118 | "hlavigne@naturalsciences.be,jean-pierre.gattuso@imev-mer.fr", | ||
119 | "identifier": "https://cran.r-project.org/package=seacarb", | 119 | "identifier": "https://cran.r-project.org/package=seacarb", | ||
120 | "identifier_type": "DOI", | 120 | "identifier_type": "DOI", | ||
121 | "orcid_authors": ",0000-0002-4533-4114", | 121 | "orcid_authors": ",0000-0002-4533-4114", | ||
122 | "relation_type": "References", | 122 | "relation_type": "References", | ||
123 | "source": "", | 123 | "source": "", | ||
124 | "title": "seacarb: seawater carbonate chemistry with R. R | 124 | "title": "seacarb: seawater carbonate chemistry with R. R | ||
125 | package version 2.4", | 125 | package version 2.4", | ||
126 | "year": "2011" | 126 | "year": "2011" | ||
127 | } | 127 | } | ||
128 | ], | 128 | ], | ||
129 | "relationships_as_object": [], | 129 | "relationships_as_object": [], | ||
130 | "relationships_as_subject": [], | 130 | "relationships_as_subject": [], | ||
131 | "repository_name": "PANGAEA (Data Publisher for Earth & | 131 | "repository_name": "PANGAEA (Data Publisher for Earth & | ||
132 | Environmental Science)", | 132 | Environmental Science)", | ||
133 | "resource_type": "text/tab-separated-values - filename: Endo_2013", | 133 | "resource_type": "text/tab-separated-values - filename: Endo_2013", | ||
134 | "resources": [], | 134 | "resources": [], | ||
135 | "source_metadata_created": "2013", | 135 | "source_metadata_created": "2013", | ||
136 | "source_metadata_modified": "", | 136 | "source_metadata_modified": "", | ||
137 | "state": "active", | 137 | "state": "active", | ||
138 | "subject_areas": [ | 138 | "subject_areas": [ | ||
139 | { | 139 | { | ||
140 | "subject_area_additional": "", | 140 | "subject_area_additional": "", | ||
141 | "subject_area_name": "BiologicalClassification" | 141 | "subject_area_name": "BiologicalClassification" | ||
142 | }, | 142 | }, | ||
143 | { | 143 | { | ||
144 | "subject_area_additional": "", | 144 | "subject_area_additional": "", | ||
145 | "subject_area_name": "Biosphere" | 145 | "subject_area_name": "Biosphere" | ||
146 | }, | 146 | }, | ||
147 | { | 147 | { | ||
148 | "subject_area_additional": "", | 148 | "subject_area_additional": "", | ||
149 | "subject_area_name": "Chemistry" | 149 | "subject_area_name": "Chemistry" | ||
150 | }, | 150 | }, | ||
151 | { | 151 | { | ||
152 | "subject_area_additional": "", | 152 | "subject_area_additional": "", | ||
153 | "subject_area_name": "Ecology" | 153 | "subject_area_name": "Ecology" | ||
154 | }, | 154 | }, | ||
155 | { | 155 | { | ||
156 | "subject_area_additional": "", | 156 | "subject_area_additional": "", | ||
157 | "subject_area_name": "Oceans" | 157 | "subject_area_name": "Oceans" | ||
158 | } | 158 | } | ||
159 | ], | 159 | ], | ||
160 | "tags": [ | 160 | "tags": [ | ||
161 | { | 161 | { | ||
n | n | 162 | "display_name": "Aquaria 20 L", | ||
163 | "id": "62c412c1-2294-406a-ad79-183330400def", | ||||
164 | "name": "Aquaria 20 L", | ||||
165 | "state": "active", | ||||
166 | "vocabulary_id": null | ||||
167 | }, | ||||
168 | { | ||||
162 | "display_name": "Bottles or small containers-Aquaria 20 L", | 169 | "display_name": "Bottles or small containers", | ||
163 | "id": "be154617-73a3-4ed4-b54f-69e22323c12a", | 170 | "id": "ba227243-af91-4efc-8086-790112e90e09", | ||
164 | "name": "Bottles or small containers-Aquaria 20 L", | 171 | "name": "Bottles or small containers", | ||
165 | "state": "active", | 172 | "state": "active", | ||
166 | "vocabulary_id": null | 173 | "vocabulary_id": null | ||
167 | }, | 174 | }, | ||
168 | { | 175 | { | ||
169 | "display_name": "Community composition and diversity", | 176 | "display_name": "Community composition and diversity", | ||
170 | "id": "7579ffcb-0715-49e4-b2d3-fddd764ef3be", | 177 | "id": "7579ffcb-0715-49e4-b2d3-fddd764ef3be", | ||
171 | "name": "Community composition and diversity", | 178 | "name": "Community composition and diversity", | ||
172 | "state": "active", | 179 | "state": "active", | ||
173 | "vocabulary_id": null | 180 | "vocabulary_id": null | ||
174 | }, | 181 | }, | ||
175 | { | 182 | { | ||
176 | "display_name": "Entire community", | 183 | "display_name": "Entire community", | ||
177 | "id": "6e1a8708-bc7c-4fa2-af8d-8a3c7bf9112a", | 184 | "id": "6e1a8708-bc7c-4fa2-af8d-8a3c7bf9112a", | ||
178 | "name": "Entire community", | 185 | "name": "Entire community", | ||
179 | "state": "active", | 186 | "state": "active", | ||
180 | "vocabulary_id": null | 187 | "vocabulary_id": null | ||
181 | }, | 188 | }, | ||
182 | { | 189 | { | ||
183 | "display_name": "Laboratory experiment", | 190 | "display_name": "Laboratory experiment", | ||
184 | "id": "c6c00754-c769-4932-a517-bff2c9512884", | 191 | "id": "c6c00754-c769-4932-a517-bff2c9512884", | ||
185 | "name": "Laboratory experiment", | 192 | "name": "Laboratory experiment", | ||
186 | "state": "active", | 193 | "state": "active", | ||
187 | "vocabulary_id": null | 194 | "vocabulary_id": null | ||
188 | }, | 195 | }, | ||
189 | { | 196 | { | ||
n | 190 | "display_name": "Micro-nutrients", | n | 197 | "display_name": "Micro", |
191 | "id": "b5119884-054f-4af9-b5c1-d579cfa3e966", | 198 | "id": "e2a31315-e95b-4c2f-b71e-335ad0d694ec", | ||
192 | "name": "Micro-nutrients", | 199 | "name": "Micro", | ||
193 | "state": "active", | 200 | "state": "active", | ||
194 | "vocabulary_id": null | 201 | "vocabulary_id": null | ||
195 | }, | 202 | }, | ||
196 | { | 203 | { | ||
197 | "display_name": "North Atlantic", | 204 | "display_name": "North Atlantic", | ||
198 | "id": "72c150cb-b0a4-479b-a0c5-f23ebb039ab7", | 205 | "id": "72c150cb-b0a4-479b-a0c5-f23ebb039ab7", | ||
199 | "name": "North Atlantic", | 206 | "name": "North Atlantic", | ||
200 | "state": "active", | 207 | "state": "active", | ||
201 | "vocabulary_id": null | 208 | "vocabulary_id": null | ||
202 | }, | 209 | }, | ||
203 | { | 210 | { | ||
204 | "display_name": "Open ocean", | 211 | "display_name": "Open ocean", | ||
205 | "id": "72162f7d-1d24-4e48-89e5-c8c7499326d3", | 212 | "id": "72162f7d-1d24-4e48-89e5-c8c7499326d3", | ||
206 | "name": "Open ocean", | 213 | "name": "Open ocean", | ||
207 | "state": "active", | 214 | "state": "active", | ||
208 | "vocabulary_id": null | 215 | "vocabulary_id": null | ||
209 | }, | 216 | }, | ||
210 | { | 217 | { | ||
211 | "display_name": "Pelagos", | 218 | "display_name": "Pelagos", | ||
212 | "id": "012f5b69-4e75-4f54-8ac4-8bf192cafaa2", | 219 | "id": "012f5b69-4e75-4f54-8ac4-8bf192cafaa2", | ||
213 | "name": "Pelagos", | 220 | "name": "Pelagos", | ||
214 | "state": "active", | 221 | "state": "active", | ||
215 | "vocabulary_id": null | 222 | "vocabulary_id": null | ||
216 | }, | 223 | }, | ||
217 | { | 224 | { | ||
n | n | 225 | "display_name": "Photosynthesis", | ||
226 | "id": "ab256517-eb7b-4eed-ad52-64a0ee98fe87", | ||||
227 | "name": "Photosynthesis", | ||||
228 | "state": "active", | ||||
229 | "vocabulary_id": null | ||||
230 | }, | ||||
231 | { | ||||
218 | "display_name": "Primary production-Photosynthesis", | 232 | "display_name": "Primary production", | ||
219 | "id": "446160f8-ac15-4da8-a39f-79b6c421e396", | 233 | "id": "aca6914d-a728-406d-a5b9-dd9593c21e4e", | ||
220 | "name": "Primary production-Photosynthesis", | 234 | "name": "Primary production", | ||
221 | "state": "active", | 235 | "state": "active", | ||
222 | "vocabulary_id": null | 236 | "vocabulary_id": null | ||
223 | }, | 237 | }, | ||
224 | { | 238 | { | ||
225 | "display_name": "Temperate", | 239 | "display_name": "Temperate", | ||
226 | "id": "31aaeb0c-a4a5-4a8e-9c90-be1eff0cac91", | 240 | "id": "31aaeb0c-a4a5-4a8e-9c90-be1eff0cac91", | ||
227 | "name": "Temperate", | 241 | "name": "Temperate", | ||
t | t | 242 | "state": "active", | ||
243 | "vocabulary_id": null | ||||
244 | }, | ||||
245 | { | ||||
246 | "display_name": "nutrients", | ||||
247 | "id": "46776643-4fc4-4ec7-b6bb-623620baae77", | ||||
248 | "name": "nutrients", | ||||
228 | "state": "active", | 249 | "state": "active", | ||
229 | "vocabulary_id": null | 250 | "vocabulary_id": null | ||
230 | } | 251 | } | ||
231 | ], | 252 | ], | ||
232 | "title": "Seawater carbonate chemistry and phytoplankton and | 253 | "title": "Seawater carbonate chemistry and phytoplankton and | ||
233 | eubacterial community compositions in the northwest subarctic | 254 | eubacterial community compositions in the northwest subarctic | ||
234 | Pacific", | 255 | Pacific", | ||
235 | "type": "vdataset", | 256 | "type": "vdataset", | ||
236 | "url": "https://doi.org/10.1594/PANGAEA.820333" | 257 | "url": "https://doi.org/10.1594/PANGAEA.820333" | ||
237 | } | 258 | } |