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  "author": "Moya, Aur\u00e9lie",
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  "author": "Moya, Aur\u00e9lie",
            
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  "author_email": "",
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  "author_email": "",
            
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  "citation": [],
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  "citation": [],
            
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  "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700",
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  "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700",
            
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  "doi": "10.1594/PANGAEA.847720",
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  "doi": "10.1594/PANGAEA.847720",
            
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  "doi_date_published": "2015",
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  "doi_date_published": "2015",
            
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  "doi_publisher": "",
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  "doi_publisher": "",
            
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  "doi_status": "True",
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  "doi_status": "True",
            
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  "extra_authors": [
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  "extra_authors": [
            
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    {
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    {
            
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      "extra_author": "Huisman, L",
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      "extra_author": "Huisman, L",
            
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      "familyName": "Huisman",
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      "familyName": "Huisman",
            
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      "givenName": "L",
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      "givenName": "L",
            
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      "orcid": ""
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      "orcid": ""
            
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    },
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    {
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    {
            
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      "extra_author": "For\u00eat, S",
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      "extra_author": "For\u00eat, S",
            
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      "familyName": "For\u00eat",
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      "familyName": "For\u00eat",
            
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      "givenName": "S",
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      "givenName": "S",
            
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      "orcid": ""
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      "orcid": ""
            
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    },
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    },
            
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    {
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    {
            
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      "extra_author": "Gattuso, Jean-Pierre",
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      "extra_author": "Gattuso, Jean-Pierre",
            
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      "familyName": "Gattuso",
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      "familyName": "Gattuso",
            
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      "givenName": "Jean-Pierre",
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      "givenName": "Jean-Pierre",
            
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      "orcid": "0000-0002-4533-4114"
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      "orcid": "0000-0002-4533-4114"
            
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    },
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    },
            
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    {
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    {
            
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      "extra_author": "Hayward, D C",
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      "extra_author": "Hayward, D C",
            
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      "familyName": "Hayward",
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      "familyName": "Hayward",
            
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      "givenName": "D C",
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      "givenName": "D C",
            
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      "orcid": "0000-0003-2937-2425"
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      "orcid": "0000-0003-2937-2425"
            
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    },
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    },
            
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    {
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    {
            
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      "extra_author": "Ball, E E",
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      "extra_author": "Ball, E E",
            
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      "familyName": "Ball",
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      "familyName": "Ball",
            
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      "givenName": "E E",
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      "givenName": "E E",
            
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      "orcid": "0000-0002-6052-1495"
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      "orcid": "0000-0002-6052-1495"
            
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    },
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    },
            
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    {
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    {
            
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      "extra_author": "Miller, David J",
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      "extra_author": "Miller, David J",
            
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      "familyName": "Miller",
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      "familyName": "Miller",
            
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      "givenName": "David J",
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      "givenName": "David J",
            
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      "orcid": "0000-0003-0291-9531"
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      "orcid": "0000-0003-0291-9531"
            
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    }
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    }
            
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  ],
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  ],
            
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  "familyName": "Moya",
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  "familyName": "Moya",
            
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  "givenName": "Aur\u00e9lie",
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  "givenName": "Aur\u00e9lie",
            
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  "groups": [],
            
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  "license_id": "CC-BY-3.0",
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  "license_id": "CC-BY-3.0",
            
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  "license_title": "CC-BY-3.0",
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  "license_title": "CC-BY-3.0",
            
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  "metadata_created": "2024-11-29T11:45:25.464374",
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  "metadata_modified": "2024-11-29T11:45:25.464380",
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  "metadata_modified": "2024-11-30T10:42:10.776803",
            
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  "name": "png-doi-10-1594-pangaea-847720",
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  "name": "png-doi-10-1594-pangaea-847720",
            
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  "notes": "Corals play a key role in ocean ecosystems and carbonate 
58
  "notes": "Corals play a key role in ocean ecosystems and carbonate 
            
59
balance, but their molecular response to ocean acidification remains 
59
balance, but their molecular response to ocean acidification remains 
            
60
unclear. The only previous whole-transcriptome study documented 
60
unclear. The only previous whole-transcriptome study documented 
            
61
extensive disruption of gene expression, particularly of genes 
61
extensive disruption of gene expression, particularly of genes 
            
62
encoding skeletal organic matrix proteins, in juvenile corals 
62
encoding skeletal organic matrix proteins, in juvenile corals 
            
63
(Acropora millepora) after short-term (3 d) exposure to elevated pCO2. 
63
(Acropora millepora) after short-term (3 d) exposure to elevated pCO2. 
            
64
In this study, whole-transcriptome analysis was used to compare the 
64
In this study, whole-transcriptome analysis was used to compare the 
            
65
effects of such 'acute' (3 d) exposure to elevated pCO2 with a longer 
65
effects of such 'acute' (3 d) exposure to elevated pCO2 with a longer 
            
66
('prolonged'; 9 d) period of exposure beginning immediately 
66
('prolonged'; 9 d) period of exposure beginning immediately 
            
67
post-fertilization. Far fewer genes were differentially expressed 
67
post-fertilization. Far fewer genes were differentially expressed 
            
68
under the 9-d treatment, and although the transcriptome data implied 
68
under the 9-d treatment, and although the transcriptome data implied 
            
69
wholesale disruption of metabolism and calcification genes in the 
69
wholesale disruption of metabolism and calcification genes in the 
            
70
acute treatment experiment, expression of most genes was at control 
70
acute treatment experiment, expression of most genes was at control 
            
71
levels after prolonged treatment. There was little overlap between the 
71
levels after prolonged treatment. There was little overlap between the 
            
72
genes responding to the acute and prolonged treatments, but heat shock 
72
genes responding to the acute and prolonged treatments, but heat shock 
            
73
proteins (HSPs) and heat shock factors (HSFs) were over-represented 
73
proteins (HSPs) and heat shock factors (HSFs) were over-represented 
            
74
amongst the genes responding to both treatments. Amongst these was an 
74
amongst the genes responding to both treatments. Amongst these was an 
            
75
HSP70 gene previously shown to be involved in acclimation to thermal 
75
HSP70 gene previously shown to be involved in acclimation to thermal 
            
76
stress in a field population of another acroporid coral. The most 
76
stress in a field population of another acroporid coral. The most 
            
77
obvious feature of the molecular response in the 9-d treatment 
77
obvious feature of the molecular response in the 9-d treatment 
            
78
experiment was the upregulation of five distinct Bcl-2 family members, 
78
experiment was the upregulation of five distinct Bcl-2 family members, 
            
79
the majority predicted to be anti-apoptotic. This suggests that an 
79
the majority predicted to be anti-apoptotic. This suggests that an 
            
80
important component of the longer term response to elevated CO2 is 
80
important component of the longer term response to elevated CO2 is 
            
81
suppression of apoptosis. It therefore appears that juvenile A. 
81
suppression of apoptosis. It therefore appears that juvenile A. 
            
82
millepora have the capacity to rapidly acclimate to elevated pCO2, a 
82
millepora have the capacity to rapidly acclimate to elevated pCO2, a 
            
83
process mediated by upregulation of specific HSPs and a suite of Bcl-2 
83
process mediated by upregulation of specific HSPs and a suite of Bcl-2 
            
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family members.",
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family members.",
            
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Science): The information system PANGAEA is operated as an Open Access 
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Science): The information system PANGAEA is operated as an Open Access 
            
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library aimed at archiving, publishing and distributing georeferenced 
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library aimed at archiving, publishing and distributing georeferenced 
            
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data from earth system research. PANGAEA guarantees long-term 
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data from earth system research. PANGAEA guarantees long-term 
            
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availability (greater than 10 years) of its content. PANGAEA is open 
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availability (greater than 10 years) of its content. PANGAEA is open 
            
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to any project, institution, or individual scientist to use or to 
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to any project, institution, or individual scientist to use or to 
            
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archive and publish data. PANGAEA focuses on georeferenced 
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archive and publish data. PANGAEA focuses on georeferenced 
            
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observational data, experimental data, and models/simulations. 
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observational data, experimental data, and models/simulations. 
            
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Citability, comprehensive metadata descriptions, interoperability of 
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Citability, comprehensive metadata descriptions, interoperability of 
            
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data and metadata, a high degree of structural and semantic 
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data and metadata, a high degree of structural and semantic 
            
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harmonization of the data inventory as well as the commitment of the 
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harmonization of the data inventory as well as the commitment of the 
            
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hosting institutions ensures FAIRness of archived data.",
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hosting institutions ensures FAIRness of archived data.",
            
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    "state": "active",
            
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    "type": "organization"
            
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  "private": false,
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  "private": false,
            
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  "publication_year": "2015",
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  "publication_year": "2015",
            
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  "related_identifiers": [
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  "related_identifiers": [
            
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    {
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    {
            
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      "authors": "Moya Aur\u00e9lie,Huisman L,For\u00eat S,Gattuso 
116
      "authors": "Moya Aur\u00e9lie,Huisman L,For\u00eat S,Gattuso 
            
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Jean-Pierre,Hayward D C,Ball E E,Miller David J",
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Jean-Pierre,Hayward D C,Ball E E,Miller David J",
            
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      "email_authors": 
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      "email_authors": 
            
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"aurelie.moya@jcu.edu.au,,,jean-pierre.gattuso@imev-mer.fr,,,",
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"aurelie.moya@jcu.edu.au,,,jean-pierre.gattuso@imev-mer.fr,,,",
            
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      "identifier": "https://doi.org/10.1111/mec.13021",
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      "identifier": "https://doi.org/10.1111/mec.13021",
            
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      "identifier_type": "DOI",
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      "identifier_type": "DOI",
            
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      "orcid_authors": 
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      "orcid_authors": 
            
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533-4114,0000-0003-2937-2425,0000-0002-6052-1495,0000-0003-0291-9531",
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533-4114,0000-0003-2937-2425,0000-0002-6052-1495,0000-0003-0291-9531",
            
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      "relation_type": "IsSupplementTo",
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      "relation_type": "IsSupplementTo",
            
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      "source": "Molecular Ecology",
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      "source": "Molecular Ecology",
            
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      "title": "Rapid acclimation of juvenile corals to CO2-mediated 
126
      "title": "Rapid acclimation of juvenile corals to CO2-mediated 
            
127
acidification by upregulation of heat shock protein and Bcl-2 genes",
127
acidification by upregulation of heat shock protein and Bcl-2 genes",
            
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      "year": "2015"
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      "year": "2015"
            
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    },
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    },
            
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    {
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    {
            
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      "authors": "Gattuso Jean-Pierre,Epitalon Jean-Marie,Lavigne 
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      "authors": "Gattuso Jean-Pierre,Epitalon Jean-Marie,Lavigne 
            
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H\u00e9lo\u00efse",
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H\u00e9lo\u00efse",
            
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      "email_authors": 
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      "email_authors": 
            
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"jean-pierre.gattuso@imev-mer.fr,,hlavigne@naturalsciences.be",
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"jean-pierre.gattuso@imev-mer.fr,,hlavigne@naturalsciences.be",
            
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      "identifier": "https://cran.r-project.org/package=seacarb",
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      "identifier": "https://cran.r-project.org/package=seacarb",
            
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      "identifier_type": "DOI",
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      "identifier_type": "DOI",
            
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      "orcid_authors": "0000-0002-4533-4114,,",
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      "orcid_authors": "0000-0002-4533-4114,,",
            
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      "relation_type": "References",
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      "relation_type": "References",
            
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      "source": "",
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      "source": "",
            
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      "title": "seacarb: seawater carbonate chemistry with R. R 
140
      "title": "seacarb: seawater carbonate chemistry with R. R 
            
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package version 3.0.6",
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package version 3.0.6",
            
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      "year": "2015"
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      "year": "2015"
            
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    }
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    }
            
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  ],
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  ],
            
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  "repository_name": "PANGAEA (Data Publisher for Earth & 
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  "repository_name": "PANGAEA (Data Publisher for Earth & 
            
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Environmental Science)",
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Environmental Science)",
            
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  "resource_type": "text/tab-separated-values - filename: Moya_2015",
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  "resource_type": "text/tab-separated-values - filename: Moya_2015",
            
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  "resources": [],
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  "resources": [],
            
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  "source_metadata_created": "2015",
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  "source_metadata_created": "2015",
            
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  "state": "active",
            
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    {
            
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      "subject_area_additional": "",
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      "subject_area_additional": "",
            
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      "subject_area_name": "BiologicalClassification"
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      "subject_area_name": "BiologicalClassification"
            
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    },
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    },
            
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    {
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    {
            
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      "subject_area_additional": "",
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      "subject_area_additional": "",
            
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      "subject_area_name": "Biosphere"
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      "subject_area_name": "Biosphere"
            
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    },
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    },
            
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    {
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    {
            
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      "subject_area_additional": "",
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      "subject_area_additional": "",
            
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      "subject_area_name": "Chemistry"
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      "subject_area_name": "Chemistry"
            
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    },
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    },
            
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    {
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    {
            
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      "subject_area_additional": "",
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      "subject_area_additional": "",
            
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      "subject_area_name": "Ecology"
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      "subject_area_name": "Ecology"
            
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    }
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    }
            
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  ],
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  ],
            
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  "tags": [
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  "tags": [
            
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    {
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    {
            
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      "display_name": "1000 L or  1 m2",
            
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      "id": "d920ecdb-c44e-43f2-bb4c-ffdc3a3c398c",
            
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      "name": "1000 L or  1 m2",
            
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      "state": "active",
            
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      "vocabulary_id": null
            
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    },
            
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    {
            
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      "display_name": "Acropora millepora",
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      "display_name": "Acropora millepora",
            
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      "id": "ad762cbe-e297-46ee-b902-d6bcc62f0e10",
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      "id": "ad762cbe-e297-46ee-b902-d6bcc62f0e10",
            
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      "name": "Acropora millepora",
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      "name": "Acropora millepora",
            
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      "state": "active",
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      "state": "active",
            
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      "vocabulary_id": null
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      "vocabulary_id": null
            
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    },
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    },
            
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    {
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    {
            
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      "display_name": "Animalia",
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      "display_name": "Animalia",
            
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      "id": "e645e194-a2f7-40f1-ae7c-c1496be6f6bf",
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      "id": "e645e194-a2f7-40f1-ae7c-c1496be6f6bf",
            
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      "name": "Animalia",
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      "name": "Animalia",
            
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      "state": "active",
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      "state": "active",
            
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      "vocabulary_id": null
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      "vocabulary_id": null
            
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    },
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    },
            
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    {
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    {
            
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      "display_name": "Benthic animals",
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      "display_name": "Benthic animals",
            
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      "id": "ba711ac9-d2d3-4cff-8023-8b85163344bb",
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      "id": "ba711ac9-d2d3-4cff-8023-8b85163344bb",
            
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      "name": "Benthic animals",
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      "name": "Benthic animals",
            
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      "state": "active",
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      "state": "active",
            
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      "vocabulary_id": null
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      "vocabulary_id": null
            
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    },
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    },
            
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    {
201
    {
            
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      "display_name": "Benthos",
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      "display_name": "Benthos",
            
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      "id": "55bc70f2-ff73-4d9a-89f6-16358d0d9b87",
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      "id": "55bc70f2-ff73-4d9a-89f6-16358d0d9b87",
            
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      "name": "Benthos",
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      "name": "Benthos",
            
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      "state": "active",
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      "state": "active",
            
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      "vocabulary_id": null
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      "vocabulary_id": null
            
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    },
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    },
            
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    {
208
    {
            
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      "display_name": "Cnidaria",
209
      "display_name": "Cnidaria",
            
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      "id": "5c3a6df6-61df-4230-b9e3-7768cbada71d",
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      "id": "5c3a6df6-61df-4230-b9e3-7768cbada71d",
            
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      "name": "Cnidaria",
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      "name": "Cnidaria",
            
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      "state": "active",
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      "state": "active",
            
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      "vocabulary_id": null
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      "vocabulary_id": null
            
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    },
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    },
            
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    {
215
    {
            
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      "display_name": "Coast and continental shelf",
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      "display_name": "Coast and continental shelf",
            
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      "id": "58eb1929-34b5-4fd9-ac44-824f0e51de40",
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      "id": "58eb1929-34b5-4fd9-ac44-824f0e51de40",
            
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      "name": "Coast and continental shelf",
218
      "name": "Coast and continental shelf",
            
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      "state": "active",
219
      "state": "active",
            
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      "vocabulary_id": null
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      "vocabulary_id": null
            
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    },
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    },
            
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    {
222
    {
            
t
216
      "display_name": "Containers and aquaria 20-1000 L or  1 m2",
t
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      "display_name": "Containers and aquaria 20",
            
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      "id": "a9d9036d-3fe8-4fb1-bcb9-07b8a3a3fe11",
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      "id": "18d57eca-7aec-4d8a-9a57-92bf32a45d53",
            
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      "name": "Containers and aquaria 20-1000 L or  1 m2",
225
      "name": "Containers and aquaria 20",
            
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      "state": "active",
226
      "state": "active",
            
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      "vocabulary_id": null
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      "vocabulary_id": null
            
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    },
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    },
            
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    {
229
    {
            
223
      "display_name": "Gene expression incl. proteomics",
230
      "display_name": "Gene expression incl. proteomics",
            
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      "id": "a266e76f-1f2a-427a-97e6-8e248d591f17",
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      "id": "a266e76f-1f2a-427a-97e6-8e248d591f17",
            
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      "name": "Gene expression incl. proteomics",
232
      "name": "Gene expression incl. proteomics",
            
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      "state": "active",
233
      "state": "active",
            
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      "vocabulary_id": null
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      "vocabulary_id": null
            
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    },
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    },
            
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    {
236
    {
            
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      "display_name": "Laboratory experiment",
237
      "display_name": "Laboratory experiment",
            
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      "id": "c6c00754-c769-4932-a517-bff2c9512884",
238
      "id": "c6c00754-c769-4932-a517-bff2c9512884",
            
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      "name": "Laboratory experiment",
239
      "name": "Laboratory experiment",
            
233
      "state": "active",
240
      "state": "active",
            
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      "vocabulary_id": null
241
      "vocabulary_id": null
            
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    },
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    },
            
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    {
243
    {
            
237
      "display_name": "Single species",
244
      "display_name": "Single species",
            
238
      "id": "88de69be-3bdd-4cf8-b6a1-386d72c5888d",
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      "id": "88de69be-3bdd-4cf8-b6a1-386d72c5888d",
            
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      "name": "Single species",
246
      "name": "Single species",
            
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      "state": "active",
247
      "state": "active",
            
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      "vocabulary_id": null
248
      "vocabulary_id": null
            
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    },
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    },
            
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    {
250
    {
            
244
      "display_name": "South Pacific",
251
      "display_name": "South Pacific",
            
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      "id": "d9590299-7cec-4210-a3e5-eff66f886e09",
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      "id": "d9590299-7cec-4210-a3e5-eff66f886e09",
            
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      "name": "South Pacific",
253
      "name": "South Pacific",
            
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      "state": "active",
254
      "state": "active",
            
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      "vocabulary_id": null
255
      "vocabulary_id": null
            
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    },
256
    },
            
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    {
257
    {
            
251
      "display_name": "Tropical",
258
      "display_name": "Tropical",
            
252
      "id": "db8bd80f-8578-455b-acc6-6adbeae406b8",
259
      "id": "db8bd80f-8578-455b-acc6-6adbeae406b8",
            
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      "name": "Tropical",
260
      "name": "Tropical",
            
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      "state": "active",
261
      "state": "active",
            
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      "vocabulary_id": null
262
      "vocabulary_id": null
            
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    }
263
    }
            
257
  ],
264
  ],
            
258
  "title": "Rapid acclimation of juvenile corals to CO2-mediated 
265
  "title": "Rapid acclimation of juvenile corals to CO2-mediated 
            
259
acidification by upregulation of heat shock protein and Bcl-2 genes",
266
acidification by upregulation of heat shock protein and Bcl-2 genes",
            
260
  "type": "vdataset",
267
  "type": "vdataset",
            
261
  "url": "https://doi.org/10.1594/PANGAEA.847720"
268
  "url": "https://doi.org/10.1594/PANGAEA.847720"
            
262
}
269
}