Changes
On November 30, 2024 at 2:28:51 PM UTC, admin:
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Moved Seawater carbonate chemistry and protein sports of barnicle Balanus amphitrite during experiments, 2011 from organization PANGAEA (Biosphere) to organization PANGAEA (Biological Classification)
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Removed tag Bottles or small containers-Aquaria 20 L from Seawater carbonate chemistry and protein sports of barnicle Balanus amphitrite during experiments, 2011
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Added the following tags to Seawater carbonate chemistry and protein sports of barnicle Balanus amphitrite during experiments, 2011
f | 1 | { | f | 1 | { |
2 | "author": "Wong, Kevin K W", | 2 | "author": "Wong, Kevin K W", | ||
3 | "author_email": "", | 3 | "author_email": "", | ||
4 | "citation": [], | 4 | "citation": [], | ||
5 | "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700", | 5 | "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700", | ||
6 | "doi": "10.1594/PANGAEA.770091", | 6 | "doi": "10.1594/PANGAEA.770091", | ||
7 | "doi_date_published": "2011", | 7 | "doi_date_published": "2011", | ||
8 | "doi_publisher": "", | 8 | "doi_publisher": "", | ||
9 | "doi_status": "True", | 9 | "doi_status": "True", | ||
10 | "extra_authors": [ | 10 | "extra_authors": [ | ||
11 | { | 11 | { | ||
12 | "extra_author": "Lane, Ackley Charles", | 12 | "extra_author": "Lane, Ackley Charles", | ||
13 | "familyName": "Lane", | 13 | "familyName": "Lane", | ||
14 | "givenName": "Ackley Charles", | 14 | "givenName": "Ackley Charles", | ||
15 | "orcid": "" | 15 | "orcid": "" | ||
16 | }, | 16 | }, | ||
17 | { | 17 | { | ||
18 | "extra_author": "Leung, Priscilla TY", | 18 | "extra_author": "Leung, Priscilla TY", | ||
19 | "familyName": "Leung", | 19 | "familyName": "Leung", | ||
20 | "givenName": "Priscilla TY", | 20 | "givenName": "Priscilla TY", | ||
21 | "orcid": "" | 21 | "orcid": "" | ||
22 | }, | 22 | }, | ||
23 | { | 23 | { | ||
24 | "extra_author": "Thlyagarajan, V", | 24 | "extra_author": "Thlyagarajan, V", | ||
25 | "familyName": "Thlyagarajan", | 25 | "familyName": "Thlyagarajan", | ||
26 | "givenName": "V", | 26 | "givenName": "V", | ||
27 | "orcid": "" | 27 | "orcid": "" | ||
28 | } | 28 | } | ||
29 | ], | 29 | ], | ||
30 | "familyName": "Wong", | 30 | "familyName": "Wong", | ||
31 | "givenName": "Kevin K W", | 31 | "givenName": "Kevin K W", | ||
32 | "groups": [], | 32 | "groups": [], | ||
33 | "id": "6dbf9846-d491-473e-9f4a-584f32c6c4c8", | 33 | "id": "6dbf9846-d491-473e-9f4a-584f32c6c4c8", | ||
34 | "isopen": false, | 34 | "isopen": false, | ||
35 | "license_id": "CC-BY-3.0", | 35 | "license_id": "CC-BY-3.0", | ||
36 | "license_title": "CC-BY-3.0", | 36 | "license_title": "CC-BY-3.0", | ||
37 | "metadata_created": "2024-11-29T11:34:23.895886", | 37 | "metadata_created": "2024-11-29T11:34:23.895886", | ||
n | 38 | "metadata_modified": "2024-11-29T11:34:23.895901", | n | 38 | "metadata_modified": "2024-11-30T14:28:51.042532", |
39 | "name": "png-doi-10-1594-pangaea-770091", | 39 | "name": "png-doi-10-1594-pangaea-770091", | ||
40 | "notes": "The majority of benthic marine invertebrates have a | 40 | "notes": "The majority of benthic marine invertebrates have a | ||
41 | complex life cycle, during which the pelagic larvae select a suitable | 41 | complex life cycle, during which the pelagic larvae select a suitable | ||
42 | substrate, attach to it, and then metamorphose into benthic adults. | 42 | substrate, attach to it, and then metamorphose into benthic adults. | ||
43 | Anthropogenic ocean acidification (OA) is postulated to affect larval | 43 | Anthropogenic ocean acidification (OA) is postulated to affect larval | ||
44 | metamorphic success through an altered protein expression pattern | 44 | metamorphic success through an altered protein expression pattern | ||
45 | (proteome structure) and post-translational modifications. To test | 45 | (proteome structure) and post-translational modifications. To test | ||
46 | this hypothesis, larvae of an economically and ecologically important | 46 | this hypothesis, larvae of an economically and ecologically important | ||
47 | barnacle species Balanus amphitrite, were cultured from nauplius to | 47 | barnacle species Balanus amphitrite, were cultured from nauplius to | ||
48 | the cyprid stage in the present (control) and in the projected | 48 | the cyprid stage in the present (control) and in the projected | ||
49 | elevated concentrations of CO2 for the year 2100 (the OA treatment). | 49 | elevated concentrations of CO2 for the year 2100 (the OA treatment). | ||
50 | Cyprid response to OA was analyzed at the total proteome level as well | 50 | Cyprid response to OA was analyzed at the total proteome level as well | ||
51 | as two protein post-translational modification (phosphorylation and | 51 | as two protein post-translational modification (phosphorylation and | ||
52 | glycosylation) levels using a 2-DE based proteomic approach. The | 52 | glycosylation) levels using a 2-DE based proteomic approach. The | ||
53 | cyprid proteome showed OA-driven changes. Proteins that were | 53 | cyprid proteome showed OA-driven changes. Proteins that were | ||
54 | differentially up or down regulated by OA come from three major | 54 | differentially up or down regulated by OA come from three major | ||
55 | groups, namely those related to energy-metabolism, respiration, and | 55 | groups, namely those related to energy-metabolism, respiration, and | ||
56 | molecular chaperones, illustrating a potential strategy that the | 56 | molecular chaperones, illustrating a potential strategy that the | ||
57 | barnacle larvae may employ to tolerate OA stress. The differentially | 57 | barnacle larvae may employ to tolerate OA stress. The differentially | ||
58 | expressed proteins were tentatively identified as OA-responsive, | 58 | expressed proteins were tentatively identified as OA-responsive, | ||
59 | effectively creating unique protein expression signatures for OA | 59 | effectively creating unique protein expression signatures for OA | ||
60 | scenario of 2100. This study showed the promise of using a sentinel | 60 | scenario of 2100. This study showed the promise of using a sentinel | ||
61 | and non-model species to examine the impact of OA at the proteome | 61 | and non-model species to examine the impact of OA at the proteome | ||
62 | level.", | 62 | level.", | ||
63 | "num_resources": 0, | 63 | "num_resources": 0, | ||
n | 64 | "num_tags": 12, | n | 64 | "num_tags": 13, |
65 | "orcid": "", | 65 | "orcid": "", | ||
66 | "organization": { | 66 | "organization": { | ||
67 | "approval_status": "approved", | 67 | "approval_status": "approved", | ||
n | 68 | "created": "2024-11-29T11:32:00.143130", | n | 68 | "created": "2024-11-30T14:19:14.458899", |
69 | "description": "PANGAEA (Data Publisher for Earth & Environmental | 69 | "description": "PANGAEA (Data Publisher for Earth & Environmental | ||
70 | Science): The information system PANGAEA is operated as an Open Access | 70 | Science): The information system PANGAEA is operated as an Open Access | ||
71 | library aimed at archiving, publishing and distributing georeferenced | 71 | library aimed at archiving, publishing and distributing georeferenced | ||
72 | data from earth system research. PANGAEA guarantees long-term | 72 | data from earth system research. PANGAEA guarantees long-term | ||
73 | availability (greater than 10 years) of its content. PANGAEA is open | 73 | availability (greater than 10 years) of its content. PANGAEA is open | ||
74 | to any project, institution, or individual scientist to use or to | 74 | to any project, institution, or individual scientist to use or to | ||
75 | archive and publish data. PANGAEA focuses on georeferenced | 75 | archive and publish data. PANGAEA focuses on georeferenced | ||
76 | observational data, experimental data, and models/simulations. | 76 | observational data, experimental data, and models/simulations. | ||
77 | Citability, comprehensive metadata descriptions, interoperability of | 77 | Citability, comprehensive metadata descriptions, interoperability of | ||
78 | data and metadata, a high degree of structural and semantic | 78 | data and metadata, a high degree of structural and semantic | ||
79 | harmonization of the data inventory as well as the commitment of the | 79 | harmonization of the data inventory as well as the commitment of the | ||
80 | hosting institutions ensures FAIRness of archived data.", | 80 | hosting institutions ensures FAIRness of archived data.", | ||
n | 81 | "id": "3226ef9c-20d1-43fd-ba8f-fa35c8c9fb5d", | n | 81 | "id": "e4c6c709-6080-430f-8979-e57014b1b0ee", |
82 | "image_url": "pangaea_topicbiosphere.png", | 82 | "image_url": "pangaea_topicbiologicalclassification.png", | ||
83 | "is_organization": true, | 83 | "is_organization": true, | ||
n | 84 | "name": "pangaea_biosphere", | n | 84 | "name": "pangaea_biologicalclassification", |
85 | "state": "active", | 85 | "state": "active", | ||
n | 86 | "title": "PANGAEA (Biosphere)", | n | 86 | "title": "PANGAEA (Biological Classification)", |
87 | "type": "organization" | 87 | "type": "organization" | ||
88 | }, | 88 | }, | ||
n | 89 | "owner_org": "3226ef9c-20d1-43fd-ba8f-fa35c8c9fb5d", | n | 89 | "owner_org": "e4c6c709-6080-430f-8979-e57014b1b0ee", |
90 | "private": false, | 90 | "private": false, | ||
91 | "publication_year": "2011", | 91 | "publication_year": "2011", | ||
92 | "related_identifiers": [ | 92 | "related_identifiers": [ | ||
93 | { | 93 | { | ||
94 | "authors": "Wong Kevin K W,Lane Ackley Charles,Leung Priscilla | 94 | "authors": "Wong Kevin K W,Lane Ackley Charles,Leung Priscilla | ||
95 | TY,Thlyagarajan V", | 95 | TY,Thlyagarajan V", | ||
96 | "email_authors": ",,,", | 96 | "email_authors": ",,,", | ||
97 | "identifier": "https://doi.org/10.1016/j.cbd.2011.07.001", | 97 | "identifier": "https://doi.org/10.1016/j.cbd.2011.07.001", | ||
98 | "identifier_type": "DOI", | 98 | "identifier_type": "DOI", | ||
99 | "orcid_authors": ",,,", | 99 | "orcid_authors": ",,,", | ||
100 | "relation_type": "IsSupplementTo", | 100 | "relation_type": "IsSupplementTo", | ||
101 | "source": "Comparative Biochemistry and Physiology Part D: | 101 | "source": "Comparative Biochemistry and Physiology Part D: | ||
102 | Genomics & Proteomics", | 102 | Genomics & Proteomics", | ||
103 | "title": "Response of larval barnacle proteome to CO2-driven | 103 | "title": "Response of larval barnacle proteome to CO2-driven | ||
104 | seawater acidification", | 104 | seawater acidification", | ||
105 | "year": "2011" | 105 | "year": "2011" | ||
106 | } | 106 | } | ||
107 | ], | 107 | ], | ||
108 | "relationships_as_object": [], | 108 | "relationships_as_object": [], | ||
109 | "relationships_as_subject": [], | 109 | "relationships_as_subject": [], | ||
110 | "repository_name": "PANGAEA (Data Publisher for Earth & | 110 | "repository_name": "PANGAEA (Data Publisher for Earth & | ||
111 | Environmental Science)", | 111 | Environmental Science)", | ||
112 | "resource_type": "text/tab-separated-values - filename: | 112 | "resource_type": "text/tab-separated-values - filename: | ||
113 | C_chem_computation_Wong_2011", | 113 | C_chem_computation_Wong_2011", | ||
114 | "resources": [], | 114 | "resources": [], | ||
115 | "source_metadata_created": "2011", | 115 | "source_metadata_created": "2011", | ||
116 | "source_metadata_modified": "", | 116 | "source_metadata_modified": "", | ||
117 | "state": "active", | 117 | "state": "active", | ||
118 | "subject_areas": [ | 118 | "subject_areas": [ | ||
119 | { | 119 | { | ||
120 | "subject_area_additional": "", | 120 | "subject_area_additional": "", | ||
121 | "subject_area_name": "BiologicalClassification" | 121 | "subject_area_name": "BiologicalClassification" | ||
122 | }, | 122 | }, | ||
123 | { | 123 | { | ||
124 | "subject_area_additional": "", | 124 | "subject_area_additional": "", | ||
125 | "subject_area_name": "Biosphere" | 125 | "subject_area_name": "Biosphere" | ||
126 | }, | 126 | }, | ||
127 | { | 127 | { | ||
128 | "subject_area_additional": "", | 128 | "subject_area_additional": "", | ||
129 | "subject_area_name": "Chemistry" | 129 | "subject_area_name": "Chemistry" | ||
130 | } | 130 | } | ||
131 | ], | 131 | ], | ||
132 | "tags": [ | 132 | "tags": [ | ||
133 | { | 133 | { | ||
134 | "display_name": "Animalia", | 134 | "display_name": "Animalia", | ||
135 | "id": "e645e194-a2f7-40f1-ae7c-c1496be6f6bf", | 135 | "id": "e645e194-a2f7-40f1-ae7c-c1496be6f6bf", | ||
136 | "name": "Animalia", | 136 | "name": "Animalia", | ||
137 | "state": "active", | 137 | "state": "active", | ||
138 | "vocabulary_id": null | 138 | "vocabulary_id": null | ||
139 | }, | 139 | }, | ||
140 | { | 140 | { | ||
n | n | 141 | "display_name": "Aquaria 20 L", | ||
142 | "id": "62c412c1-2294-406a-ad79-183330400def", | ||||
143 | "name": "Aquaria 20 L", | ||||
144 | "state": "active", | ||||
145 | "vocabulary_id": null | ||||
146 | }, | ||||
147 | { | ||||
141 | "display_name": "Arthropoda", | 148 | "display_name": "Arthropoda", | ||
142 | "id": "34a6ba80-52d8-40d3-a5e5-38a9c5abeba1", | 149 | "id": "34a6ba80-52d8-40d3-a5e5-38a9c5abeba1", | ||
143 | "name": "Arthropoda", | 150 | "name": "Arthropoda", | ||
144 | "state": "active", | 151 | "state": "active", | ||
145 | "vocabulary_id": null | 152 | "vocabulary_id": null | ||
146 | }, | 153 | }, | ||
147 | { | 154 | { | ||
148 | "display_name": "Balanus amphitrite", | 155 | "display_name": "Balanus amphitrite", | ||
149 | "id": "a8d017f1-ac76-4fbe-9883-952f3b271caf", | 156 | "id": "a8d017f1-ac76-4fbe-9883-952f3b271caf", | ||
150 | "name": "Balanus amphitrite", | 157 | "name": "Balanus amphitrite", | ||
151 | "state": "active", | 158 | "state": "active", | ||
152 | "vocabulary_id": null | 159 | "vocabulary_id": null | ||
153 | }, | 160 | }, | ||
154 | { | 161 | { | ||
t | 155 | "display_name": "Bottles or small containers-Aquaria 20 L", | t | 162 | "display_name": "Bottles or small containers", |
156 | "id": "be154617-73a3-4ed4-b54f-69e22323c12a", | 163 | "id": "ba227243-af91-4efc-8086-790112e90e09", | ||
157 | "name": "Bottles or small containers-Aquaria 20 L", | 164 | "name": "Bottles or small containers", | ||
158 | "state": "active", | 165 | "state": "active", | ||
159 | "vocabulary_id": null | 166 | "vocabulary_id": null | ||
160 | }, | 167 | }, | ||
161 | { | 168 | { | ||
162 | "display_name": "Coast and continental shelf", | 169 | "display_name": "Coast and continental shelf", | ||
163 | "id": "58eb1929-34b5-4fd9-ac44-824f0e51de40", | 170 | "id": "58eb1929-34b5-4fd9-ac44-824f0e51de40", | ||
164 | "name": "Coast and continental shelf", | 171 | "name": "Coast and continental shelf", | ||
165 | "state": "active", | 172 | "state": "active", | ||
166 | "vocabulary_id": null | 173 | "vocabulary_id": null | ||
167 | }, | 174 | }, | ||
168 | { | 175 | { | ||
169 | "display_name": "Gene expression incl. proteomics", | 176 | "display_name": "Gene expression incl. proteomics", | ||
170 | "id": "a266e76f-1f2a-427a-97e6-8e248d591f17", | 177 | "id": "a266e76f-1f2a-427a-97e6-8e248d591f17", | ||
171 | "name": "Gene expression incl. proteomics", | 178 | "name": "Gene expression incl. proteomics", | ||
172 | "state": "active", | 179 | "state": "active", | ||
173 | "vocabulary_id": null | 180 | "vocabulary_id": null | ||
174 | }, | 181 | }, | ||
175 | { | 182 | { | ||
176 | "display_name": "Laboratory experiment", | 183 | "display_name": "Laboratory experiment", | ||
177 | "id": "c6c00754-c769-4932-a517-bff2c9512884", | 184 | "id": "c6c00754-c769-4932-a517-bff2c9512884", | ||
178 | "name": "Laboratory experiment", | 185 | "name": "Laboratory experiment", | ||
179 | "state": "active", | 186 | "state": "active", | ||
180 | "vocabulary_id": null | 187 | "vocabulary_id": null | ||
181 | }, | 188 | }, | ||
182 | { | 189 | { | ||
183 | "display_name": "North Pacific", | 190 | "display_name": "North Pacific", | ||
184 | "id": "efbdbaff-aa72-4a57-8e03-e9f84253d644", | 191 | "id": "efbdbaff-aa72-4a57-8e03-e9f84253d644", | ||
185 | "name": "North Pacific", | 192 | "name": "North Pacific", | ||
186 | "state": "active", | 193 | "state": "active", | ||
187 | "vocabulary_id": null | 194 | "vocabulary_id": null | ||
188 | }, | 195 | }, | ||
189 | { | 196 | { | ||
190 | "display_name": "Pelagos", | 197 | "display_name": "Pelagos", | ||
191 | "id": "012f5b69-4e75-4f54-8ac4-8bf192cafaa2", | 198 | "id": "012f5b69-4e75-4f54-8ac4-8bf192cafaa2", | ||
192 | "name": "Pelagos", | 199 | "name": "Pelagos", | ||
193 | "state": "active", | 200 | "state": "active", | ||
194 | "vocabulary_id": null | 201 | "vocabulary_id": null | ||
195 | }, | 202 | }, | ||
196 | { | 203 | { | ||
197 | "display_name": "Single species", | 204 | "display_name": "Single species", | ||
198 | "id": "88de69be-3bdd-4cf8-b6a1-386d72c5888d", | 205 | "id": "88de69be-3bdd-4cf8-b6a1-386d72c5888d", | ||
199 | "name": "Single species", | 206 | "name": "Single species", | ||
200 | "state": "active", | 207 | "state": "active", | ||
201 | "vocabulary_id": null | 208 | "vocabulary_id": null | ||
202 | }, | 209 | }, | ||
203 | { | 210 | { | ||
204 | "display_name": "Tropical", | 211 | "display_name": "Tropical", | ||
205 | "id": "db8bd80f-8578-455b-acc6-6adbeae406b8", | 212 | "id": "db8bd80f-8578-455b-acc6-6adbeae406b8", | ||
206 | "name": "Tropical", | 213 | "name": "Tropical", | ||
207 | "state": "active", | 214 | "state": "active", | ||
208 | "vocabulary_id": null | 215 | "vocabulary_id": null | ||
209 | }, | 216 | }, | ||
210 | { | 217 | { | ||
211 | "display_name": "Zooplankton", | 218 | "display_name": "Zooplankton", | ||
212 | "id": "9a829b96-807f-48c1-84c6-8fa50a64f5a5", | 219 | "id": "9a829b96-807f-48c1-84c6-8fa50a64f5a5", | ||
213 | "name": "Zooplankton", | 220 | "name": "Zooplankton", | ||
214 | "state": "active", | 221 | "state": "active", | ||
215 | "vocabulary_id": null | 222 | "vocabulary_id": null | ||
216 | } | 223 | } | ||
217 | ], | 224 | ], | ||
218 | "title": "Seawater carbonate chemistry and protein sports of | 225 | "title": "Seawater carbonate chemistry and protein sports of | ||
219 | barnicle Balanus amphitrite during experiments, 2011", | 226 | barnicle Balanus amphitrite during experiments, 2011", | ||
220 | "type": "vdataset", | 227 | "type": "vdataset", | ||
221 | "url": "https://doi.org/10.1594/PANGAEA.770091" | 228 | "url": "https://doi.org/10.1594/PANGAEA.770091" | ||
222 | } | 229 | } |