Changes
On November 30, 2024 at 2:31:44 PM UTC, admin:
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Moved Seawater carbonate chemistry and the microbiome of the octocoral Lobophytum pauciflorum from organization PANGAEA (Biosphere) to organization PANGAEA (Biological Classification)
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Removed tag Containers and aquaria 20-1000 L or 1 m2 from Seawater carbonate chemistry and the microbiome of the octocoral Lobophytum pauciflorum
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Added the following tags to Seawater carbonate chemistry and the microbiome of the octocoral Lobophytum pauciflorum
f | 1 | { | f | 1 | { |
2 | "author": "Wessels, Wiebke", | 2 | "author": "Wessels, Wiebke", | ||
3 | "author_email": "", | 3 | "author_email": "", | ||
4 | "citation": [], | 4 | "citation": [], | ||
5 | "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700", | 5 | "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700", | ||
6 | "doi": "10.1594/PANGAEA.893397", | 6 | "doi": "10.1594/PANGAEA.893397", | ||
7 | "doi_date_published": "2017", | 7 | "doi_date_published": "2017", | ||
8 | "doi_publisher": "", | 8 | "doi_publisher": "", | ||
9 | "doi_status": "True", | 9 | "doi_status": "True", | ||
10 | "extra_authors": [ | 10 | "extra_authors": [ | ||
11 | { | 11 | { | ||
12 | "extra_author": "Sprungala, Susanne", | 12 | "extra_author": "Sprungala, Susanne", | ||
13 | "familyName": "Sprungala", | 13 | "familyName": "Sprungala", | ||
14 | "givenName": "Susanne", | 14 | "givenName": "Susanne", | ||
15 | "orcid": "" | 15 | "orcid": "" | ||
16 | }, | 16 | }, | ||
17 | { | 17 | { | ||
18 | "extra_author": "Watson, Sue-Ann", | 18 | "extra_author": "Watson, Sue-Ann", | ||
19 | "familyName": "Watson", | 19 | "familyName": "Watson", | ||
20 | "givenName": "Sue-Ann", | 20 | "givenName": "Sue-Ann", | ||
21 | "orcid": "0000-0002-9818-7429" | 21 | "orcid": "0000-0002-9818-7429" | ||
22 | }, | 22 | }, | ||
23 | { | 23 | { | ||
24 | "extra_author": "Miller, David J", | 24 | "extra_author": "Miller, David J", | ||
25 | "familyName": "Miller", | 25 | "familyName": "Miller", | ||
26 | "givenName": "David J", | 26 | "givenName": "David J", | ||
27 | "orcid": "0000-0003-0291-9531" | 27 | "orcid": "0000-0003-0291-9531" | ||
28 | }, | 28 | }, | ||
29 | { | 29 | { | ||
30 | "extra_author": "Bourne, David G", | 30 | "extra_author": "Bourne, David G", | ||
31 | "familyName": "Bourne", | 31 | "familyName": "Bourne", | ||
32 | "givenName": "David G", | 32 | "givenName": "David G", | ||
33 | "orcid": "" | 33 | "orcid": "" | ||
34 | } | 34 | } | ||
35 | ], | 35 | ], | ||
36 | "familyName": "Wessels", | 36 | "familyName": "Wessels", | ||
37 | "givenName": "Wiebke", | 37 | "givenName": "Wiebke", | ||
38 | "groups": [], | 38 | "groups": [], | ||
39 | "id": "09e4f3f9-ca91-406e-9f78-2cdcdba7c1e1", | 39 | "id": "09e4f3f9-ca91-406e-9f78-2cdcdba7c1e1", | ||
40 | "isopen": false, | 40 | "isopen": false, | ||
41 | "license_id": "CC-BY-3.0", | 41 | "license_id": "CC-BY-3.0", | ||
42 | "license_title": "CC-BY-3.0", | 42 | "license_title": "CC-BY-3.0", | ||
43 | "metadata_created": "2024-11-29T11:46:08.069737", | 43 | "metadata_created": "2024-11-29T11:46:08.069737", | ||
n | 44 | "metadata_modified": "2024-11-29T11:46:08.069744", | n | 44 | "metadata_modified": "2024-11-30T14:31:44.508228", |
45 | "name": "png-doi-10-1594-pangaea-893397", | 45 | "name": "png-doi-10-1594-pangaea-893397", | ||
46 | "notes": "Bacteria associated with marine invertebrates are thought | 46 | "notes": "Bacteria associated with marine invertebrates are thought | ||
47 | to have a range of important roles that benefit the host including | 47 | to have a range of important roles that benefit the host including | ||
48 | production of compounds that may exclude pathogenic microorganisms and | 48 | production of compounds that may exclude pathogenic microorganisms and | ||
49 | recycling of essential nutrients. This study characterised the | 49 | recycling of essential nutrients. This study characterised the | ||
50 | microbiome of a gonochoric octocoral, Lobophytum pauciflorum, and | 50 | microbiome of a gonochoric octocoral, Lobophytum pauciflorum, and | ||
51 | investigated whether either sex or environmental stresses influenced | 51 | investigated whether either sex or environmental stresses influenced | ||
52 | the diversity of the associated microbiome through amplicon profiling | 52 | the diversity of the associated microbiome through amplicon profiling | ||
53 | of the bacterial 16S rRNA gene. Sequences affiliated to | 53 | of the bacterial 16S rRNA gene. Sequences affiliated to | ||
54 | Spirochaetaceae and Endozoicimonaceae dominated the microbiome of L. | 54 | Spirochaetaceae and Endozoicimonaceae dominated the microbiome of L. | ||
55 | pauciflorum, representing 43% and 21% of the community, respectively. | 55 | pauciflorum, representing 43% and 21% of the community, respectively. | ||
56 | Among the dominant class affiliations, no sex-specific differences | 56 | Among the dominant class affiliations, no sex-specific differences | ||
57 | were detected, though unassigned sequences were at a 2-fold higher | 57 | were detected, though unassigned sequences were at a 2-fold higher | ||
58 | relative abundance in samples from female individuals than from males. | 58 | relative abundance in samples from female individuals than from males. | ||
59 | These potentially novel sequences contributed to observed differences | 59 | These potentially novel sequences contributed to observed differences | ||
60 | between sexes as detected by a multivariate analysis at the OTU level. | 60 | between sexes as detected by a multivariate analysis at the OTU level. | ||
61 | Exposing L. pauciflorum fragments to increased temperature | 61 | Exposing L. pauciflorum fragments to increased temperature | ||
62 | (31\u00b0C), decreased pH (7.9) or both stressors simultaneously for | 62 | (31\u00b0C), decreased pH (7.9) or both stressors simultaneously for | ||
63 | 12 days did not significantly alter the microbial community, | 63 | 12 days did not significantly alter the microbial community, | ||
64 | indicating that the soft coral microbiome is relatively resilient to | 64 | indicating that the soft coral microbiome is relatively resilient to | ||
65 | short-term environmental stress.", | 65 | short-term environmental stress.", | ||
66 | "num_resources": 0, | 66 | "num_resources": 0, | ||
n | 67 | "num_tags": 13, | n | 67 | "num_tags": 14, |
68 | "orcid": "", | 68 | "orcid": "", | ||
69 | "organization": { | 69 | "organization": { | ||
70 | "approval_status": "approved", | 70 | "approval_status": "approved", | ||
n | 71 | "created": "2024-11-29T11:32:00.143130", | n | 71 | "created": "2024-11-30T14:19:14.458899", |
72 | "description": "PANGAEA (Data Publisher for Earth & Environmental | 72 | "description": "PANGAEA (Data Publisher for Earth & Environmental | ||
73 | Science): The information system PANGAEA is operated as an Open Access | 73 | Science): The information system PANGAEA is operated as an Open Access | ||
74 | library aimed at archiving, publishing and distributing georeferenced | 74 | library aimed at archiving, publishing and distributing georeferenced | ||
75 | data from earth system research. PANGAEA guarantees long-term | 75 | data from earth system research. PANGAEA guarantees long-term | ||
76 | availability (greater than 10 years) of its content. PANGAEA is open | 76 | availability (greater than 10 years) of its content. PANGAEA is open | ||
77 | to any project, institution, or individual scientist to use or to | 77 | to any project, institution, or individual scientist to use or to | ||
78 | archive and publish data. PANGAEA focuses on georeferenced | 78 | archive and publish data. PANGAEA focuses on georeferenced | ||
79 | observational data, experimental data, and models/simulations. | 79 | observational data, experimental data, and models/simulations. | ||
80 | Citability, comprehensive metadata descriptions, interoperability of | 80 | Citability, comprehensive metadata descriptions, interoperability of | ||
81 | data and metadata, a high degree of structural and semantic | 81 | data and metadata, a high degree of structural and semantic | ||
82 | harmonization of the data inventory as well as the commitment of the | 82 | harmonization of the data inventory as well as the commitment of the | ||
83 | hosting institutions ensures FAIRness of archived data.", | 83 | hosting institutions ensures FAIRness of archived data.", | ||
n | 84 | "id": "3226ef9c-20d1-43fd-ba8f-fa35c8c9fb5d", | n | 84 | "id": "e4c6c709-6080-430f-8979-e57014b1b0ee", |
85 | "image_url": "pangaea_topicbiosphere.png", | 85 | "image_url": "pangaea_topicbiologicalclassification.png", | ||
86 | "is_organization": true, | 86 | "is_organization": true, | ||
n | 87 | "name": "pangaea_biosphere", | n | 87 | "name": "pangaea_biologicalclassification", |
88 | "state": "active", | 88 | "state": "active", | ||
n | 89 | "title": "PANGAEA (Biosphere)", | n | 89 | "title": "PANGAEA (Biological Classification)", |
90 | "type": "organization" | 90 | "type": "organization" | ||
91 | }, | 91 | }, | ||
n | 92 | "owner_org": "3226ef9c-20d1-43fd-ba8f-fa35c8c9fb5d", | n | 92 | "owner_org": "e4c6c709-6080-430f-8979-e57014b1b0ee", |
93 | "private": false, | 93 | "private": false, | ||
94 | "publication_year": "2017", | 94 | "publication_year": "2017", | ||
95 | "related_identifiers": [ | 95 | "related_identifiers": [ | ||
96 | { | 96 | { | ||
97 | "authors": "Wessels Wiebke,Sprungala Susanne,Watson | 97 | "authors": "Wessels Wiebke,Sprungala Susanne,Watson | ||
98 | Sue-Ann,Miller David J,Bourne David G", | 98 | Sue-Ann,Miller David J,Bourne David G", | ||
99 | "email_authors": | 99 | "email_authors": | ||
100 | ",,sueann.watson@my.jcu.edu.au,,david.bourne@jcu.edu.au", | 100 | ",,sueann.watson@my.jcu.edu.au,,david.bourne@jcu.edu.au", | ||
101 | "identifier": "https://doi.org/10.1093/femsec/fix013", | 101 | "identifier": "https://doi.org/10.1093/femsec/fix013", | ||
102 | "identifier_type": "DOI", | 102 | "identifier_type": "DOI", | ||
103 | "orcid_authors": ",,0000-0002-9818-7429,0000-0003-0291-9531,", | 103 | "orcid_authors": ",,0000-0002-9818-7429,0000-0003-0291-9531,", | ||
104 | "relation_type": "IsSupplementTo", | 104 | "relation_type": "IsSupplementTo", | ||
105 | "source": "FEMS Microbiology Ecology", | 105 | "source": "FEMS Microbiology Ecology", | ||
106 | "title": "The microbiome of the octocoral Lobophytum | 106 | "title": "The microbiome of the octocoral Lobophytum | ||
107 | pauciflorum: minor differences between sexes and resilience to | 107 | pauciflorum: minor differences between sexes and resilience to | ||
108 | short-term stress", | 108 | short-term stress", | ||
109 | "year": "2017" | 109 | "year": "2017" | ||
110 | }, | 110 | }, | ||
111 | { | 111 | { | ||
112 | "authors": "Gattuso Jean-Pierre,Epitalon Jean-Marie,Lavigne | 112 | "authors": "Gattuso Jean-Pierre,Epitalon Jean-Marie,Lavigne | ||
113 | H\u00e9lo\u00efse,Orr James C,Gentili Bernard,Proye | 113 | H\u00e9lo\u00efse,Orr James C,Gentili Bernard,Proye | ||
114 | Aur\u00e9lien,Soetaert Karline,Rae James", | 114 | Aur\u00e9lien,Soetaert Karline,Rae James", | ||
115 | "email_authors": | 115 | "email_authors": | ||
116 | ,j.orr@iaea.org,bernard.gentili@orange.fr,,karline.soetaert@nioz.nl,", | 116 | ,j.orr@iaea.org,bernard.gentili@orange.fr,,karline.soetaert@nioz.nl,", | ||
117 | "identifier": "https://cran.r-project.org/package=seacarb", | 117 | "identifier": "https://cran.r-project.org/package=seacarb", | ||
118 | "identifier_type": "DOI", | 118 | "identifier_type": "DOI", | ||
119 | "orcid_authors": | 119 | "orcid_authors": | ||
120 | 4114,,,0000-0002-8707-7080,,,0000-0003-4603-7100,0000-0003-3904-2526", | 120 | 4114,,,0000-0002-8707-7080,,,0000-0003-4603-7100,0000-0003-3904-2526", | ||
121 | "relation_type": "References", | 121 | "relation_type": "References", | ||
122 | "source": "", | 122 | "source": "", | ||
123 | "title": "seacarb: seawater carbonate chemistry with R. R | 123 | "title": "seacarb: seawater carbonate chemistry with R. R | ||
124 | package version 3.1", | 124 | package version 3.1", | ||
125 | "year": "2016" | 125 | "year": "2016" | ||
126 | } | 126 | } | ||
127 | ], | 127 | ], | ||
128 | "relationships_as_object": [], | 128 | "relationships_as_object": [], | ||
129 | "relationships_as_subject": [], | 129 | "relationships_as_subject": [], | ||
130 | "repository_name": "PANGAEA (Data Publisher for Earth & | 130 | "repository_name": "PANGAEA (Data Publisher for Earth & | ||
131 | Environmental Science)", | 131 | Environmental Science)", | ||
132 | "resource_type": "text/tab-separated-values - filename: | 132 | "resource_type": "text/tab-separated-values - filename: | ||
133 | Wessels-etal_2017_ME", | 133 | Wessels-etal_2017_ME", | ||
134 | "resources": [], | 134 | "resources": [], | ||
135 | "source_metadata_created": "2017", | 135 | "source_metadata_created": "2017", | ||
136 | "source_metadata_modified": "", | 136 | "source_metadata_modified": "", | ||
137 | "state": "active", | 137 | "state": "active", | ||
138 | "subject_areas": [ | 138 | "subject_areas": [ | ||
139 | { | 139 | { | ||
140 | "subject_area_additional": "", | 140 | "subject_area_additional": "", | ||
141 | "subject_area_name": "BiologicalClassification" | 141 | "subject_area_name": "BiologicalClassification" | ||
142 | }, | 142 | }, | ||
143 | { | 143 | { | ||
144 | "subject_area_additional": "", | 144 | "subject_area_additional": "", | ||
145 | "subject_area_name": "Biosphere" | 145 | "subject_area_name": "Biosphere" | ||
146 | }, | 146 | }, | ||
147 | { | 147 | { | ||
148 | "subject_area_additional": "", | 148 | "subject_area_additional": "", | ||
149 | "subject_area_name": "Chemistry" | 149 | "subject_area_name": "Chemistry" | ||
150 | } | 150 | } | ||
151 | ], | 151 | ], | ||
152 | "tags": [ | 152 | "tags": [ | ||
153 | { | 153 | { | ||
n | n | 154 | "display_name": "1000 L or 1 m2", | ||
155 | "id": "d920ecdb-c44e-43f2-bb4c-ffdc3a3c398c", | ||||
156 | "name": "1000 L or 1 m2", | ||||
157 | "state": "active", | ||||
158 | "vocabulary_id": null | ||||
159 | }, | ||||
160 | { | ||||
154 | "display_name": "Animalia", | 161 | "display_name": "Animalia", | ||
155 | "id": "e645e194-a2f7-40f1-ae7c-c1496be6f6bf", | 162 | "id": "e645e194-a2f7-40f1-ae7c-c1496be6f6bf", | ||
156 | "name": "Animalia", | 163 | "name": "Animalia", | ||
157 | "state": "active", | 164 | "state": "active", | ||
158 | "vocabulary_id": null | 165 | "vocabulary_id": null | ||
159 | }, | 166 | }, | ||
160 | { | 167 | { | ||
161 | "display_name": "Benthic animals", | 168 | "display_name": "Benthic animals", | ||
162 | "id": "ba711ac9-d2d3-4cff-8023-8b85163344bb", | 169 | "id": "ba711ac9-d2d3-4cff-8023-8b85163344bb", | ||
163 | "name": "Benthic animals", | 170 | "name": "Benthic animals", | ||
164 | "state": "active", | 171 | "state": "active", | ||
165 | "vocabulary_id": null | 172 | "vocabulary_id": null | ||
166 | }, | 173 | }, | ||
167 | { | 174 | { | ||
168 | "display_name": "Benthos", | 175 | "display_name": "Benthos", | ||
169 | "id": "55bc70f2-ff73-4d9a-89f6-16358d0d9b87", | 176 | "id": "55bc70f2-ff73-4d9a-89f6-16358d0d9b87", | ||
170 | "name": "Benthos", | 177 | "name": "Benthos", | ||
171 | "state": "active", | 178 | "state": "active", | ||
172 | "vocabulary_id": null | 179 | "vocabulary_id": null | ||
173 | }, | 180 | }, | ||
174 | { | 181 | { | ||
175 | "display_name": "Cnidaria", | 182 | "display_name": "Cnidaria", | ||
176 | "id": "5c3a6df6-61df-4230-b9e3-7768cbada71d", | 183 | "id": "5c3a6df6-61df-4230-b9e3-7768cbada71d", | ||
177 | "name": "Cnidaria", | 184 | "name": "Cnidaria", | ||
178 | "state": "active", | 185 | "state": "active", | ||
179 | "vocabulary_id": null | 186 | "vocabulary_id": null | ||
180 | }, | 187 | }, | ||
181 | { | 188 | { | ||
182 | "display_name": "Coast and continental shelf", | 189 | "display_name": "Coast and continental shelf", | ||
183 | "id": "58eb1929-34b5-4fd9-ac44-824f0e51de40", | 190 | "id": "58eb1929-34b5-4fd9-ac44-824f0e51de40", | ||
184 | "name": "Coast and continental shelf", | 191 | "name": "Coast and continental shelf", | ||
185 | "state": "active", | 192 | "state": "active", | ||
186 | "vocabulary_id": null | 193 | "vocabulary_id": null | ||
187 | }, | 194 | }, | ||
188 | { | 195 | { | ||
189 | "display_name": "Community composition and diversity", | 196 | "display_name": "Community composition and diversity", | ||
190 | "id": "7579ffcb-0715-49e4-b2d3-fddd764ef3be", | 197 | "id": "7579ffcb-0715-49e4-b2d3-fddd764ef3be", | ||
191 | "name": "Community composition and diversity", | 198 | "name": "Community composition and diversity", | ||
192 | "state": "active", | 199 | "state": "active", | ||
193 | "vocabulary_id": null | 200 | "vocabulary_id": null | ||
194 | }, | 201 | }, | ||
195 | { | 202 | { | ||
t | 196 | "display_name": "Containers and aquaria 20-1000 L or 1 m2", | t | 203 | "display_name": "Containers and aquaria 20", |
197 | "id": "a9d9036d-3fe8-4fb1-bcb9-07b8a3a3fe11", | 204 | "id": "18d57eca-7aec-4d8a-9a57-92bf32a45d53", | ||
198 | "name": "Containers and aquaria 20-1000 L or 1 m2", | 205 | "name": "Containers and aquaria 20", | ||
199 | "state": "active", | 206 | "state": "active", | ||
200 | "vocabulary_id": null | 207 | "vocabulary_id": null | ||
201 | }, | 208 | }, | ||
202 | { | 209 | { | ||
203 | "display_name": "Laboratory experiment", | 210 | "display_name": "Laboratory experiment", | ||
204 | "id": "c6c00754-c769-4932-a517-bff2c9512884", | 211 | "id": "c6c00754-c769-4932-a517-bff2c9512884", | ||
205 | "name": "Laboratory experiment", | 212 | "name": "Laboratory experiment", | ||
206 | "state": "active", | 213 | "state": "active", | ||
207 | "vocabulary_id": null | 214 | "vocabulary_id": null | ||
208 | }, | 215 | }, | ||
209 | { | 216 | { | ||
210 | "display_name": "Lobophytum pauciflorum", | 217 | "display_name": "Lobophytum pauciflorum", | ||
211 | "id": "fd76b79f-3db2-4a0a-961d-dbe7d1185cb0", | 218 | "id": "fd76b79f-3db2-4a0a-961d-dbe7d1185cb0", | ||
212 | "name": "Lobophytum pauciflorum", | 219 | "name": "Lobophytum pauciflorum", | ||
213 | "state": "active", | 220 | "state": "active", | ||
214 | "vocabulary_id": null | 221 | "vocabulary_id": null | ||
215 | }, | 222 | }, | ||
216 | { | 223 | { | ||
217 | "display_name": "Single species", | 224 | "display_name": "Single species", | ||
218 | "id": "88de69be-3bdd-4cf8-b6a1-386d72c5888d", | 225 | "id": "88de69be-3bdd-4cf8-b6a1-386d72c5888d", | ||
219 | "name": "Single species", | 226 | "name": "Single species", | ||
220 | "state": "active", | 227 | "state": "active", | ||
221 | "vocabulary_id": null | 228 | "vocabulary_id": null | ||
222 | }, | 229 | }, | ||
223 | { | 230 | { | ||
224 | "display_name": "South Pacific", | 231 | "display_name": "South Pacific", | ||
225 | "id": "d9590299-7cec-4210-a3e5-eff66f886e09", | 232 | "id": "d9590299-7cec-4210-a3e5-eff66f886e09", | ||
226 | "name": "South Pacific", | 233 | "name": "South Pacific", | ||
227 | "state": "active", | 234 | "state": "active", | ||
228 | "vocabulary_id": null | 235 | "vocabulary_id": null | ||
229 | }, | 236 | }, | ||
230 | { | 237 | { | ||
231 | "display_name": "Temperature", | 238 | "display_name": "Temperature", | ||
232 | "id": "8ffcba75-112d-48f4-b013-882017189fff", | 239 | "id": "8ffcba75-112d-48f4-b013-882017189fff", | ||
233 | "name": "Temperature", | 240 | "name": "Temperature", | ||
234 | "state": "active", | 241 | "state": "active", | ||
235 | "vocabulary_id": null | 242 | "vocabulary_id": null | ||
236 | }, | 243 | }, | ||
237 | { | 244 | { | ||
238 | "display_name": "Tropical", | 245 | "display_name": "Tropical", | ||
239 | "id": "db8bd80f-8578-455b-acc6-6adbeae406b8", | 246 | "id": "db8bd80f-8578-455b-acc6-6adbeae406b8", | ||
240 | "name": "Tropical", | 247 | "name": "Tropical", | ||
241 | "state": "active", | 248 | "state": "active", | ||
242 | "vocabulary_id": null | 249 | "vocabulary_id": null | ||
243 | } | 250 | } | ||
244 | ], | 251 | ], | ||
245 | "title": "Seawater carbonate chemistry and the microbiome of the | 252 | "title": "Seawater carbonate chemistry and the microbiome of the | ||
246 | octocoral Lobophytum pauciflorum", | 253 | octocoral Lobophytum pauciflorum", | ||
247 | "type": "vdataset", | 254 | "type": "vdataset", | ||
248 | "url": "https://doi.org/10.1594/PANGAEA.893397" | 255 | "url": "https://doi.org/10.1594/PANGAEA.893397" | ||
249 | } | 256 | } |