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f
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{
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{
            
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  "author": "Stumpp, Meike",
2
  "author": "Stumpp, Meike",
            
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  "author_email": "",
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  "author_email": "",
            
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  "citation": [],
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  "citation": [],
            
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  "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700",
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  "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700",
            
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  "doi": "10.1594/PANGAEA.926044",
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  "doi": "10.1594/PANGAEA.926044",
            
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  "doi_date_published": "2020",
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  "doi_date_published": "2020",
            
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  "doi_publisher": "",
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  "doi_publisher": "",
            
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  "doi_status": "True",
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  "doi_status": "True",
            
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  "extra_authors": [
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  "extra_authors": [
            
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    {
11
    {
            
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      "extra_author": "Petersen, Inga",
12
      "extra_author": "Petersen, Inga",
            
13
      "familyName": "Petersen",
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      "familyName": "Petersen",
            
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      "givenName": "Inga",
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      "givenName": "Inga",
            
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      "orcid": ""
15
      "orcid": ""
            
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    },
16
    },
            
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    {
17
    {
            
18
      "extra_author": "Thoben, Femke",
18
      "extra_author": "Thoben, Femke",
            
19
      "familyName": "Thoben",
19
      "familyName": "Thoben",
            
20
      "givenName": "Femke",
20
      "givenName": "Femke",
            
21
      "orcid": ""
21
      "orcid": ""
            
22
    },
22
    },
            
23
    {
23
    {
            
24
      "extra_author": "Yan, Jia-Jiun",
24
      "extra_author": "Yan, Jia-Jiun",
            
25
      "familyName": "Yan",
25
      "familyName": "Yan",
            
26
      "givenName": "Jia-Jiun",
26
      "givenName": "Jia-Jiun",
            
27
      "orcid": ""
27
      "orcid": ""
            
28
    },
28
    },
            
29
    {
29
    {
            
30
      "extra_author": "Hu, Marian Y",
30
      "extra_author": "Hu, Marian Y",
            
31
      "familyName": "Hu",
31
      "familyName": "Hu",
            
32
      "givenName": "Marian Y",
32
      "givenName": "Marian Y",
            
33
      "orcid": "0000-0002-8914-139X"
33
      "orcid": "0000-0002-8914-139X"
            
34
    }
34
    }
            
35
  ],
35
  ],
            
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  "familyName": "Stumpp",
36
  "familyName": "Stumpp",
            
37
  "givenName": "Meike",
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  "givenName": "Meike",
            
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  "groups": [],
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  "groups": [],
            
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  "id": "49880e3a-af3a-4713-a9b6-f427adb42ae2",
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  "id": "49880e3a-af3a-4713-a9b6-f427adb42ae2",
            
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  "isopen": false,
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  "isopen": false,
            
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  "license_id": "CC-BY-4.0",
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  "license_id": "CC-BY-4.0",
            
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  "license_title": "CC-BY-4.0",
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  "license_title": "CC-BY-4.0",
            
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  "metadata_created": "2024-11-29T11:46:35.897304",
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  "metadata_created": "2024-11-29T11:46:35.897304",
            
n
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  "metadata_modified": "2024-11-29T11:46:35.897310",
n
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  "metadata_modified": "2024-11-30T14:32:24.113367",
            
45
  "name": "png-doi-10-1594-pangaea-926044",
45
  "name": "png-doi-10-1594-pangaea-926044",
            
46
  "notes": "Larval stages of members of the Abulacraria superphylum 
46
  "notes": "Larval stages of members of the Abulacraria superphylum 
            
47
including echinoderms and hemichordates have highly alkaline midguts. 
47
including echinoderms and hemichordates have highly alkaline midguts. 
            
48
To date, the reason for the evolution of such extreme pH conditions in 
48
To date, the reason for the evolution of such extreme pH conditions in 
            
49
the gut of these organisms remains unknown. Here, we test the 
49
the gut of these organisms remains unknown. Here, we test the 
            
50
hypothesis that, analogous to the acidic stomachs of vertebrates, 
50
hypothesis that, analogous to the acidic stomachs of vertebrates, 
            
51
these alkaline conditions may represent a first defensive barrier to 
51
these alkaline conditions may represent a first defensive barrier to 
            
52
protect from environmental pathogens. pH-optimum curves for five 
52
protect from environmental pathogens. pH-optimum curves for five 
            
53
different species of marine bacteria demonstrated a rapid decrease in 
53
different species of marine bacteria demonstrated a rapid decrease in 
            
54
proliferation rates by 50\u201360% between pH 8.5 and 9.5. Using the 
54
proliferation rates by 50\u201360% between pH 8.5 and 9.5. Using the 
            
55
marine bacterium Vibrio diazotrophicus, which elicits a coordinated 
55
marine bacterium Vibrio diazotrophicus, which elicits a coordinated 
            
56
immune response in the larvae of the sea urchin Strongylocentrotus 
56
immune response in the larvae of the sea urchin Strongylocentrotus 
            
57
purpuratus, we studied the physiological responses of the midgut pH 
57
purpuratus, we studied the physiological responses of the midgut pH 
            
58
regulatory machinery to this pathogen. Gastroscopic microelectrode 
58
regulatory machinery to this pathogen. Gastroscopic microelectrode 
            
59
measurements demonstrate a stimulation of midgut alkalization upon 
59
measurements demonstrate a stimulation of midgut alkalization upon 
            
60
infection with V. diazotrophicus accompanied by an upregulation of 
60
infection with V. diazotrophicus accompanied by an upregulation of 
            
61
acid\u2013base transporter transcripts of the midgut. Pharmacological 
61
acid\u2013base transporter transcripts of the midgut. Pharmacological 
            
62
inhibition of midgut alkalization resulted in an increased mortality 
62
inhibition of midgut alkalization resulted in an increased mortality 
            
63
rate of larvae during Vibrio infection. Reductions in seawater pH 
63
rate of larvae during Vibrio infection. Reductions in seawater pH 
            
64
resembling ocean acidification conditions lead to moderate reductions 
64
resembling ocean acidification conditions lead to moderate reductions 
            
65
in midgut alkalization. However, these reductions in midgut pH do not 
65
in midgut alkalization. However, these reductions in midgut pH do not 
            
66
affect the immune response or resilience of sea urchin larvae to a 
66
affect the immune response or resilience of sea urchin larvae to a 
            
67
Vibrio infection under ocean acidification conditions. Our study 
67
Vibrio infection under ocean acidification conditions. Our study 
            
68
addressed the evolutionary benefits of the alkaline midgut of 
68
addressed the evolutionary benefits of the alkaline midgut of 
            
69
Ambulacraria larval stages. The data indicate that alkaline conditions 
69
Ambulacraria larval stages. The data indicate that alkaline conditions 
            
70
in the gut may serve as a first defensive barrier against 
70
in the gut may serve as a first defensive barrier against 
            
71
environmental pathogens and that this mechanism can compensate for 
71
environmental pathogens and that this mechanism can compensate for 
            
72
changes in seawater pH.",
72
changes in seawater pH.",
            
73
  "num_resources": 0,
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  "num_resources": 0,
            
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  "num_tags": 15,
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  "orcid": "0000-0001-7765-2996",
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  "orcid": "0000-0001-7765-2996",
            
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  "organization": {
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  "organization": {
            
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    "approval_status": "approved",
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    "approval_status": "approved",
            
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    "created": "2024-11-29T11:32:00.143130",
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    "created": "2024-11-30T14:19:14.458899",
            
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    "description": "PANGAEA (Data Publisher for Earth & Environmental 
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    "description": "PANGAEA (Data Publisher for Earth & Environmental 
            
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Science): The information system PANGAEA is operated as an Open Access 
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Science): The information system PANGAEA is operated as an Open Access 
            
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library aimed at archiving, publishing and distributing georeferenced 
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library aimed at archiving, publishing and distributing georeferenced 
            
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data from earth system research. PANGAEA guarantees long-term 
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data from earth system research. PANGAEA guarantees long-term 
            
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availability (greater than 10 years) of its content. PANGAEA is open 
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availability (greater than 10 years) of its content. PANGAEA is open 
            
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to any project, institution, or individual scientist to use or to 
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to any project, institution, or individual scientist to use or to 
            
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archive and publish data. PANGAEA focuses on georeferenced 
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archive and publish data. PANGAEA focuses on georeferenced 
            
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observational data, experimental data, and models/simulations. 
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observational data, experimental data, and models/simulations. 
            
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Citability, comprehensive metadata descriptions, interoperability of 
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Citability, comprehensive metadata descriptions, interoperability of 
            
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data and metadata, a high degree of structural and semantic 
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data and metadata, a high degree of structural and semantic 
            
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harmonization of the data inventory as well as the commitment of the 
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harmonization of the data inventory as well as the commitment of the 
            
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hosting institutions ensures FAIRness of archived data.",
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hosting institutions ensures FAIRness of archived data.",
            
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    "id": "e4c6c709-6080-430f-8979-e57014b1b0ee",
            
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    "image_url": "pangaea_topicbiosphere.png",
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    "image_url": "pangaea_topicbiologicalclassification.png",
            
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    "is_organization": true,
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    "is_organization": true,
            
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    "name": "pangaea_biosphere",
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    "name": "pangaea_biologicalclassification",
            
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    "state": "active",
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    "state": "active",
            
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    "title": "PANGAEA (Biosphere)",
n
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    "title": "PANGAEA (Biological Classification)",
            
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    "type": "organization"
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    "type": "organization"
            
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  },
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  },
            
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  "owner_org": "3226ef9c-20d1-43fd-ba8f-fa35c8c9fb5d",
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  "owner_org": "e4c6c709-6080-430f-8979-e57014b1b0ee",
            
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  "private": false,
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  "private": false,
            
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  "publication_year": "2020",
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  "publication_year": "2020",
            
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  "related_identifiers": [
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  "related_identifiers": [
            
103
    {
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    {
            
104
      "authors": "Stumpp Meike,Petersen Inga,Thoben Femke,Yan 
104
      "authors": "Stumpp Meike,Petersen Inga,Thoben Femke,Yan 
            
105
Jia-Jiun,Hu Marian Y,Stumpp Meike,Petersen Inga,Thoben Femke,Yan 
105
Jia-Jiun,Hu Marian Y,Stumpp Meike,Petersen Inga,Thoben Femke,Yan 
            
106
Jia-Jiun,Leippe Matthias,Hu Marian Y,Gattuso Jean-Pierre,Epitalon 
106
Jia-Jiun,Leippe Matthias,Hu Marian Y,Gattuso Jean-Pierre,Epitalon 
            
107
Jean-Marie,Lavigne H\u00e9lo\u00efse,Orr James,Gentili Bernard,Hagens 
107
Jean-Marie,Lavigne H\u00e9lo\u00efse,Orr James,Gentili Bernard,Hagens 
            
108
Mathilde,Hofmann Andreas,Mueller Jens-Daniel,Proye Aur\u00e9lien,Rae 
108
Mathilde,Hofmann Andreas,Mueller Jens-Daniel,Proye Aur\u00e9lien,Rae 
            
109
James,Soetaert Karline",
109
James,Soetaert Karline",
            
110
      "email_authors": 
110
      "email_authors": 
            
111
lsce.ipsl.fr,bernard.gentili@orange.fr,,,,,,karline.soetaert@nioz.nl",
111
lsce.ipsl.fr,bernard.gentili@orange.fr,,,,,,karline.soetaert@nioz.nl",
            
112
      "identifier": "https://doi.org/10.1242/jeb.222844",
112
      "identifier": "https://doi.org/10.1242/jeb.222844",
            
113
      "identifier_type": "DOI",
113
      "identifier_type": "DOI",
            
114
      "orcid_authors": 
114
      "orcid_authors": 
            
115
4,,,,,0000-0003-3980-1043,,,,0000-0003-3904-2526,0000-0003-4603-7100",
115
4,,,,,0000-0003-3980-1043,,,,0000-0003-3904-2526,0000-0003-4603-7100",
            
116
      "relation_type": "References",
116
      "relation_type": "References",
            
117
      "source": "Journal of Experimental Biology",
117
      "source": "Journal of Experimental Biology",
            
118
      "title": "Alkaline guts contribute to immunity during exposure 
118
      "title": "Alkaline guts contribute to immunity during exposure 
            
119
to acidified seawater in the sea urchin larva.",
119
to acidified seawater in the sea urchin larva.",
            
120
      "year": "2020"
120
      "year": "2020"
            
121
    },
121
    },
            
122
    {
122
    {
            
123
      "authors": "Stumpp Meike,Petersen Inga,Thoben Femke,Yan 
123
      "authors": "Stumpp Meike,Petersen Inga,Thoben Femke,Yan 
            
124
Jia-Jiun,Hu Marian Y,Stumpp Meike,Petersen Inga,Thoben Femke,Yan 
124
Jia-Jiun,Hu Marian Y,Stumpp Meike,Petersen Inga,Thoben Femke,Yan 
            
125
Jia-Jiun,Leippe Matthias,Hu Marian Y,Gattuso Jean-Pierre,Epitalon 
125
Jia-Jiun,Leippe Matthias,Hu Marian Y,Gattuso Jean-Pierre,Epitalon 
            
126
Jean-Marie,Lavigne H\u00e9lo\u00efse,Orr James,Gentili Bernard,Hagens 
126
Jean-Marie,Lavigne H\u00e9lo\u00efse,Orr James,Gentili Bernard,Hagens 
            
127
Mathilde,Hofmann Andreas,Mueller Jens-Daniel,Proye Aur\u00e9lien,Rae 
127
Mathilde,Hofmann Andreas,Mueller Jens-Daniel,Proye Aur\u00e9lien,Rae 
            
128
James,Soetaert Karline",
128
James,Soetaert Karline",
            
129
      "email_authors": 
129
      "email_authors": 
            
130
lsce.ipsl.fr,bernard.gentili@orange.fr,,,,,,karline.soetaert@nioz.nl",
130
lsce.ipsl.fr,bernard.gentili@orange.fr,,,,,,karline.soetaert@nioz.nl",
            
131
      "identifier": "https://doi.org/10.1594/PANGAEA.914693",
131
      "identifier": "https://doi.org/10.1594/PANGAEA.914693",
            
132
      "identifier_type": "DOI",
132
      "identifier_type": "DOI",
            
133
      "orcid_authors": 
133
      "orcid_authors": 
            
134
4,,,,,0000-0003-3980-1043,,,,0000-0003-3904-2526,0000-0003-4603-7100",
134
4,,,,,0000-0003-3980-1043,,,,0000-0003-3904-2526,0000-0003-4603-7100",
            
135
      "relation_type": "References",
135
      "relation_type": "References",
            
136
      "source": "",
136
      "source": "",
            
137
      "title": "Mortality, pigment cell response and ion regulatory 
137
      "title": "Mortality, pigment cell response and ion regulatory 
            
138
capacity in sea urchin larvae in response to Vibrio infection under 
138
capacity in sea urchin larvae in response to Vibrio infection under 
            
139
pharmacological and ocean acidification treatments",
139
pharmacological and ocean acidification treatments",
            
140
      "year": "2020"
140
      "year": "2020"
            
141
    },
141
    },
            
142
    {
142
    {
            
143
      "authors": "Stumpp Meike,Petersen Inga,Thoben Femke,Yan 
143
      "authors": "Stumpp Meike,Petersen Inga,Thoben Femke,Yan 
            
144
Jia-Jiun,Hu Marian Y,Stumpp Meike,Petersen Inga,Thoben Femke,Yan 
144
Jia-Jiun,Hu Marian Y,Stumpp Meike,Petersen Inga,Thoben Femke,Yan 
            
145
Jia-Jiun,Leippe Matthias,Hu Marian Y,Gattuso Jean-Pierre,Epitalon 
145
Jia-Jiun,Leippe Matthias,Hu Marian Y,Gattuso Jean-Pierre,Epitalon 
            
146
Jean-Marie,Lavigne H\u00e9lo\u00efse,Orr James,Gentili Bernard,Hagens 
146
Jean-Marie,Lavigne H\u00e9lo\u00efse,Orr James,Gentili Bernard,Hagens 
            
147
Mathilde,Hofmann Andreas,Mueller Jens-Daniel,Proye Aur\u00e9lien,Rae 
147
Mathilde,Hofmann Andreas,Mueller Jens-Daniel,Proye Aur\u00e9lien,Rae 
            
148
James,Soetaert Karline",
148
James,Soetaert Karline",
            
149
      "email_authors": 
149
      "email_authors": 
            
150
lsce.ipsl.fr,bernard.gentili@orange.fr,,,,,,karline.soetaert@nioz.nl",
150
lsce.ipsl.fr,bernard.gentili@orange.fr,,,,,,karline.soetaert@nioz.nl",
            
151
      "identifier": "https://CRAN.R-project.org/package=seacarb",
151
      "identifier": "https://CRAN.R-project.org/package=seacarb",
            
152
      "identifier_type": "DOI",
152
      "identifier_type": "DOI",
            
153
      "orcid_authors": 
153
      "orcid_authors": 
            
154
4,,,,,0000-0003-3980-1043,,,,0000-0003-3904-2526,0000-0003-4603-7100",
154
4,,,,,0000-0003-3980-1043,,,,0000-0003-3904-2526,0000-0003-4603-7100",
            
155
      "relation_type": "References",
155
      "relation_type": "References",
            
156
      "source": "",
156
      "source": "",
            
157
      "title": "seacarb: seawater carbonate chemistry with R. R 
157
      "title": "seacarb: seawater carbonate chemistry with R. R 
            
158
package version 3.2.14",
158
package version 3.2.14",
            
159
      "year": "2020"
159
      "year": "2020"
            
160
    }
160
    }
            
161
  ],
161
  ],
            
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  "relationships_as_object": [],
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  "relationships_as_object": [],
            
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  "relationships_as_subject": [],
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  "relationships_as_subject": [],
            
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  "repository_name": "PANGAEA (Data Publisher for Earth & 
164
  "repository_name": "PANGAEA (Data Publisher for Earth & 
            
165
Environmental Science)",
165
Environmental Science)",
            
166
  "resource_type": "text/tab-separated-values - filename: 
166
  "resource_type": "text/tab-separated-values - filename: 
            
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Stumpp-etal_2020_JEB",
167
Stumpp-etal_2020_JEB",
            
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  "resources": [],
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  ],
            
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  "title": "Seawater carbonate chemistry and larval morphology, 
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  "title": "Seawater carbonate chemistry and larval morphology, 
            
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pigment cell response, larval density and Gastric pH of sea urchin",
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pigment cell response, larval density and Gastric pH of sea urchin",
            
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  "url": "https://doi.org/10.1594/PANGAEA.926044"
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  "url": "https://doi.org/10.1594/PANGAEA.926044"
            
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}
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}