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{
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{
            
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  "author": "Hunkler, Simon",
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  "author": "Hunkler, Simon",
            
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  "author_email": "",
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  "author_email": "",
            
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  "citation": [],
            
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  "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700",
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  "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700",
            
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  "doi": "10.48606/40",
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  "doi": "10.48606/40",
            
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  "doi_date_published": "2022",
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  "doi_date_published": "2022",
            
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  "doi_publisher": "",
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  "doi_publisher": "",
            
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  "doi_status": "True",
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  "doi_status": "True",
            
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  "extra_authors": [
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  "extra_authors": [
            
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    {
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    {
            
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      "extra_author": "Berg, Andrej",
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      "extra_author": "Berg, Andrej",
            
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      "familyName": "Berg",
            
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      "givenName": "Andrej",
            
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      "orcid": "0000-0002-5232-1995"
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      "orcid": "0000-0002-5232-1995"
            
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    },
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    },
            
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    {
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    {
            
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      "extra_author": "Buhl, Teresa",
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      "extra_author": "Buhl, Teresa",
            
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      "familyName": "Buhl",
            
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      "givenName": "Teresa",
            
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      "orcid": ""
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      "orcid": ""
            
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    },
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    },
            
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    {
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    {
            
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      "extra_author": "Kukharenko, Oleksandra",
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      "extra_author": "Kukharenko, Oleksandra",
            
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      "familyName": "Kukharenko",
            
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      "givenName": "Oleksandra",
            
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      "orcid": "0000-0002-3285-1403"
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      "orcid": "0000-0002-3285-1403"
            
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    },
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    },
            
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    {
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    {
            
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      "extra_author": "Peter, Christine",
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      "extra_author": "Peter, Christine",
            
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n
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      "familyName": "Peter",
            
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      "givenName": "Christine",
            
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      "orcid": "0000-0002-1471-5440"
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      "orcid": "0000-0002-1471-5440"
            
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    }
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    }
            
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  ],
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  ],
            
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n
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  "familyName": "Hunkler",
            
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  "givenName": "Simon",
            
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  "groups": [],
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  "groups": [],
            
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  "id": "445ef89f-97cc-4441-aea2-7f7b7412b858",
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  "id": "445ef89f-97cc-4441-aea2-7f7b7412b858",
            
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  "isopen": false,
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  "isopen": false,
            
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  "license_id": "CC BY 4.0 Attribution",
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  "license_id": "CC BY 4.0 Attribution",
            
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  "license_title": "CC BY 4.0 Attribution",
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  "license_title": "CC BY 4.0 Attribution",
            
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  "metadata_created": "2023-01-12T13:30:57.688079",
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  "metadata_created": "2023-01-12T13:30:57.688079",
            
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  "metadata_modified": "2023-08-04T09:27:53.476284",
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  "metadata_modified": "2024-11-28T13:16:15.196537",
            
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  "name": "rdr-doi-10-48606-40",
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  "name": "rdr-doi-10-48606-40",
            
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  "notes": "Abstract: Trajectories, structures and encodermap 
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  "notes": "Abstract: Trajectories, structures and encodermap 
            
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projections of the K48-linked tri-ubiquitin system\r\nTechnicalInfo: 
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projections of the K48-linked tri-ubiquitin system\r\nTechnicalInfo: 
            
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Minima_focused.tar.gz, boltzmann_weighted.tar.gz and uniform.tar.gz 
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Minima_focused.tar.gz, boltzmann_weighted.tar.gz and uniform.tar.gz 
            
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contain the coarse grained structures that were selected for 
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contain the coarse grained structures that were selected for 
            
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back-mapping. Furthermore these archives contain the atomistic 
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back-mapping. Furthermore these archives contain the atomistic 
            
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structures (solvated and energy minimized) that were generated by the 
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structures (solvated and energy minimized) that were generated by the 
            
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back-mapping procedure, as well as the gromacs .tpr files that were 
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back-mapping procedure, as well as the gromacs .tpr files that were 
            
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used to run the BMBS simulations. Lastly these archives contain the 
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used to run the BMBS simulations. Lastly these archives contain the 
            
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encodermap projections of all BMBS trajectories. \r\nTechnicalInfo: 
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encodermap projections of all BMBS trajectories. \r\nTechnicalInfo: 
            
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The two archives in /CG_data (CG_data_part1.tar.gz and 
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The two archives in /CG_data (CG_data_part1.tar.gz and 
            
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CG_data_part2.tar.gz) contain the CG trajectories, a CG structure and 
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CG_data_part2.tar.gz) contain the CG trajectories, a CG structure and 
            
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the encodermap projection of all CG trajectories.",
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the encodermap projection of all CG trajectories.",
            
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  "num_resources": 0,
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  "num_resources": 0,
            
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  "num_tags": 5,
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  "num_tags": 5,
            
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  "orcid": "0000-0002-2476-2128",
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  "orcid": "0000-0002-2476-2128",
            
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  "organization": {
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  "organization": {
            
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    "approval_status": "approved",
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    "approval_status": "approved",
            
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    "created": "2023-01-12T13:30:23.238233",
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    "created": "2023-01-12T13:30:23.238233",
            
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    "description": "RADAR (Research Data Repository) is a 
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    "description": "RADAR (Research Data Repository) is a 
            
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cross-disciplinary repository for archiving and publishing research 
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cross-disciplinary repository for archiving and publishing research 
            
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data from completed scientific studies and projects. The focus is on 
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data from completed scientific studies and projects. The focus is on 
            
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research data from subjects that do not yet have their own 
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research data from subjects that do not yet have their own 
            
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discipline-specific infrastructures for research data management. ",
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discipline-specific infrastructures for research data management. ",
            
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    "id": "013c89a9-383c-4200-8baa-0f78bf1d91f9",
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    "id": "013c89a9-383c-4200-8baa-0f78bf1d91f9",
            
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    "image_url": "radar-logo.svg",
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    "image_url": "radar-logo.svg",
            
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    "is_organization": true,
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    "is_organization": true,
            
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    "name": "radar",
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    "name": "radar",
            
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    "state": "active",
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    "state": "active",
            
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    "title": "RADAR",
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    "title": "RADAR",
            
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    "type": "organization"
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    "type": "organization"
            
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  },
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  },
            
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  "owner_org": "013c89a9-383c-4200-8baa-0f78bf1d91f9",
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  "owner_org": "013c89a9-383c-4200-8baa-0f78bf1d91f9",
            
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  "private": false,
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  "private": false,
            
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  "production_year": "2022",
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  "production_year": "2022",
            
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  "publication_year": "2022",
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  "publication_year": "2022",
            
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  "publishers": [
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  "publishers": [
            
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    {
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    {
            
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      "publisher": "Universit\u00e4t Konstanz"
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      "publisher": "Universit\u00e4t Konstanz"
            
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    }
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    }
            
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  ],
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  ],
            
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  "relationships_as_object": [],
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  "relationships_as_object": [],
            
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  "relationships_as_subject": [],
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  "relationships_as_subject": [],
            
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  "repository_name": "RADAR (Research Data Repository)",
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  "repository_name": "RADAR (Research Data Repository)",
            
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  "resources": [],
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  "resources": [],
            
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  "services_used_list": "",
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  "services_used_list": "",
            
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  "source_metadata_created": "2022",
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  "source_metadata_created": "2022",
            
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  "source_metadata_modified": "",
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  "source_metadata_modified": "",
            
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  "state": "active",
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  "state": "active",
            
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  "subject_areas": [
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  "subject_areas": [
            
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    {
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    {
            
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      "subject_area_additional": "",
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      "subject_area_additional": "",
            
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      "subject_area_name": "Chemistry"
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      "subject_area_name": "Chemistry"
            
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    }
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    }
            
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  ],
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  ],
            
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  "tags": [
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  "tags": [
            
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    {
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    {
            
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      "display_name": "back-mapping based sampling",
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      "display_name": "back-mapping based sampling",
            
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      "id": "92d57aa5-9a55-4968-8827-f9337809e2be",
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      "id": "92d57aa5-9a55-4968-8827-f9337809e2be",
            
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      "name": "back-mapping based sampling",
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      "name": "back-mapping based sampling",
            
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      "state": "active",
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      "state": "active",
            
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      "vocabulary_id": null
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      "vocabulary_id": null
            
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    },
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    },
            
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    {
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    {
            
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      "display_name": "coarse graining",
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      "display_name": "coarse graining",
            
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      "id": "a8d5f41a-d883-4f49-acde-82ec280389f7",
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      "id": "a8d5f41a-d883-4f49-acde-82ec280389f7",
            
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      "name": "coarse graining",
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      "name": "coarse graining",
            
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      "state": "active",
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      "state": "active",
            
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      "vocabulary_id": null
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      "vocabulary_id": null
            
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    },
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    },
            
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    {
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    {
            
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      "display_name": "molecular dynamics simulations",
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      "display_name": "molecular dynamics simulations",
            
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      "id": "6da00b06-c8e3-4dac-9537-045d61324da6",
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      "id": "6da00b06-c8e3-4dac-9537-045d61324da6",
            
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      "name": "molecular dynamics simulations",
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      "name": "molecular dynamics simulations",
            
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      "state": "active",
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      "state": "active",
            
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      "vocabulary_id": null
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      "vocabulary_id": null
            
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    },
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    },
            
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    {
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    {
            
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      "display_name": "polyubiquitin",
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      "display_name": "polyubiquitin",
            
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      "id": "41003592-cc57-4e8a-80b2-40dc49cd59be",
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      "id": "41003592-cc57-4e8a-80b2-40dc49cd59be",
            
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      "name": "polyubiquitin",
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      "name": "polyubiquitin",
            
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      "state": "active",
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      "state": "active",
            
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      "vocabulary_id": null
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      "vocabulary_id": null
            
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    },
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    },
            
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    {
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    {
            
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      "display_name": "ubiquitin",
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      "display_name": "ubiquitin",
            
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      "id": "d1b4aef2-c43e-4ee4-b1e3-11b1b89845fe",
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      "id": "d1b4aef2-c43e-4ee4-b1e3-11b1b89845fe",
            
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      "name": "ubiquitin",
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      "name": "ubiquitin",
            
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      "state": "active",
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      "state": "active",
            
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      "vocabulary_id": null
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      "vocabulary_id": null
            
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    }
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    }
            
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  ],
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  ],
            
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  "title": "Generating a conformational landscape of ubiquitin chains 
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  "title": "Generating a conformational landscape of ubiquitin chains 
            
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at atomistic resolution by back-mapping based sampling",
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at atomistic resolution by back-mapping based sampling",
            
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  "type": "vdataset",
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  "type": "vdataset",
            
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  "url": "https://doi.org/10.48606/40"
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  "url": "https://doi.org/10.48606/40"
            
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}
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}