Changes
On November 30, 2024 at 10:41:19 AM UTC, admin:
-
Moved Experiment: Marine fungi may benefit from ocean acidification from organization PANGAEA (Biosphere) to organization PANGAEA (Ecology)
-
Removed tag Bottles or small containers-Aquaria 20 L from Experiment: Marine fungi may benefit from ocean acidification
-
Added the following tags to Experiment: Marine fungi may benefit from ocean acidification
f | 1 | { | f | 1 | { |
2 | "author": "Krause, Evamaria", | 2 | "author": "Krause, Evamaria", | ||
3 | "author_email": "", | 3 | "author_email": "", | ||
4 | "citation": [], | 4 | "citation": [], | ||
5 | "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700", | 5 | "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700", | ||
6 | "doi": "10.1594/PANGAEA.831726", | 6 | "doi": "10.1594/PANGAEA.831726", | ||
7 | "doi_date_published": "2013", | 7 | "doi_date_published": "2013", | ||
8 | "doi_publisher": "", | 8 | "doi_publisher": "", | ||
9 | "doi_status": "True", | 9 | "doi_status": "True", | ||
10 | "familyName": "Krause", | 10 | "familyName": "Krause", | ||
11 | "givenName": "Evamaria", | 11 | "givenName": "Evamaria", | ||
12 | "groups": [], | 12 | "groups": [], | ||
13 | "id": "d6d260d0-87ba-4089-94fa-6560bca32bdc", | 13 | "id": "d6d260d0-87ba-4089-94fa-6560bca32bdc", | ||
14 | "isopen": false, | 14 | "isopen": false, | ||
15 | "license_id": "CC-BY-3.0", | 15 | "license_id": "CC-BY-3.0", | ||
16 | "license_title": "CC-BY-3.0", | 16 | "license_title": "CC-BY-3.0", | ||
17 | "metadata_created": "2024-11-29T11:34:58.241662", | 17 | "metadata_created": "2024-11-29T11:34:58.241662", | ||
n | 18 | "metadata_modified": "2024-11-29T11:34:58.241668", | n | 18 | "metadata_modified": "2024-11-30T10:41:19.018493", |
19 | "name": "png-doi-10-1594-pangaea-831726", | 19 | "name": "png-doi-10-1594-pangaea-831726", | ||
20 | "notes": "Recent studies have discussed the consequences of ocean | 20 | "notes": "Recent studies have discussed the consequences of ocean | ||
21 | acidification for bacterial processes and diversity. However, the | 21 | acidification for bacterial processes and diversity. However, the | ||
22 | decomposition of complex substrates in marine environments, a key part | 22 | decomposition of complex substrates in marine environments, a key part | ||
23 | of the flow of energy in ecosystems, is largely mediated by marine | 23 | of the flow of energy in ecosystems, is largely mediated by marine | ||
24 | fungi. Although marine fungi have frequently been reported to prefer | 24 | fungi. Although marine fungi have frequently been reported to prefer | ||
25 | low pH levels, this group has been neglected in ocean acidification | 25 | low pH levels, this group has been neglected in ocean acidification | ||
26 | research. We present the first investigation of direct pH effects on | 26 | research. We present the first investigation of direct pH effects on | ||
27 | marine fungal abundance and community structure. In microcosm | 27 | marine fungal abundance and community structure. In microcosm | ||
28 | experiments repeated in 2 consecutive years, we incubated natural | 28 | experiments repeated in 2 consecutive years, we incubated natural | ||
29 | North Sea water for 4 wk at in situ seawater pH (8.10 and 8.26), pH | 29 | North Sea water for 4 wk at in situ seawater pH (8.10 and 8.26), pH | ||
30 | 7.82 and pH 7.67. Fungal abundance was determined by colony forming | 30 | 7.82 and pH 7.67. Fungal abundance was determined by colony forming | ||
31 | unit (cfu) counts, and fungal community structure was investigated by | 31 | unit (cfu) counts, and fungal community structure was investigated by | ||
32 | the culture-independent fingerprint method Fungal Automated Ribosomal | 32 | the culture-independent fingerprint method Fungal Automated Ribosomal | ||
33 | Intergenic Spacer Analysis (F-ARISA). Furthermore, pH at the study | 33 | Intergenic Spacer Analysis (F-ARISA). Furthermore, pH at the study | ||
34 | site was determined over a yearly cycle. Fungal cfu were on average 9 | 34 | site was determined over a yearly cycle. Fungal cfu were on average 9 | ||
35 | times higher at pH 7.82 and 34 times higher at pH 7.67 compared to in | 35 | times higher at pH 7.82 and 34 times higher at pH 7.67 compared to in | ||
36 | situ seawater pH, and we observed fungal community shifts | 36 | situ seawater pH, and we observed fungal community shifts | ||
37 | predominantly at pH 7.67. Currently, surface seawater pH at Helgoland | 37 | predominantly at pH 7.67. Currently, surface seawater pH at Helgoland | ||
38 | Roads remains >8.0 throughout the year; thus we cannot exclude that | 38 | Roads remains >8.0 throughout the year; thus we cannot exclude that | ||
39 | fungal responses may differ in regions regularly experiencing lower pH | 39 | fungal responses may differ in regions regularly experiencing lower pH | ||
40 | values. However, our results suggest that under realistic levels of | 40 | values. However, our results suggest that under realistic levels of | ||
41 | ocean acidification, marine fungi will reach greater importance in | 41 | ocean acidification, marine fungi will reach greater importance in | ||
42 | marine biogeochemical cycles. The rise of this group of organisms will | 42 | marine biogeochemical cycles. The rise of this group of organisms will | ||
43 | affect a variety of biotic interactions in the sea.", | 43 | affect a variety of biotic interactions in the sea.", | ||
44 | "num_resources": 0, | 44 | "num_resources": 0, | ||
n | 45 | "num_tags": 8, | n | 45 | "num_tags": 9, |
46 | "orcid": "0000-0002-4946-6544", | 46 | "orcid": "0000-0002-4946-6544", | ||
47 | "organization": { | 47 | "organization": { | ||
48 | "approval_status": "approved", | 48 | "approval_status": "approved", | ||
n | 49 | "created": "2024-11-29T11:32:00.143130", | n | 49 | "created": "2024-11-30T10:25:26.439072", |
50 | "description": "PANGAEA (Data Publisher for Earth & Environmental | 50 | "description": "PANGAEA (Data Publisher for Earth & Environmental | ||
51 | Science): The information system PANGAEA is operated as an Open Access | 51 | Science): The information system PANGAEA is operated as an Open Access | ||
52 | library aimed at archiving, publishing and distributing georeferenced | 52 | library aimed at archiving, publishing and distributing georeferenced | ||
53 | data from earth system research. PANGAEA guarantees long-term | 53 | data from earth system research. PANGAEA guarantees long-term | ||
54 | availability (greater than 10 years) of its content. PANGAEA is open | 54 | availability (greater than 10 years) of its content. PANGAEA is open | ||
55 | to any project, institution, or individual scientist to use or to | 55 | to any project, institution, or individual scientist to use or to | ||
56 | archive and publish data. PANGAEA focuses on georeferenced | 56 | archive and publish data. PANGAEA focuses on georeferenced | ||
57 | observational data, experimental data, and models/simulations. | 57 | observational data, experimental data, and models/simulations. | ||
58 | Citability, comprehensive metadata descriptions, interoperability of | 58 | Citability, comprehensive metadata descriptions, interoperability of | ||
59 | data and metadata, a high degree of structural and semantic | 59 | data and metadata, a high degree of structural and semantic | ||
60 | harmonization of the data inventory as well as the commitment of the | 60 | harmonization of the data inventory as well as the commitment of the | ||
61 | hosting institutions ensures FAIRness of archived data.", | 61 | hosting institutions ensures FAIRness of archived data.", | ||
n | 62 | "id": "3226ef9c-20d1-43fd-ba8f-fa35c8c9fb5d", | n | 62 | "id": "c2816fc6-b5ce-42c9-b5a4-11709b658b82", |
63 | "image_url": "pangaea_topicbiosphere.png", | 63 | "image_url": "pangaea_topicecology.png", | ||
64 | "is_organization": true, | 64 | "is_organization": true, | ||
n | 65 | "name": "pangaea_biosphere", | n | 65 | "name": "pangaea_ecology", |
66 | "state": "active", | 66 | "state": "active", | ||
n | 67 | "title": "PANGAEA (Biosphere)", | n | 67 | "title": "PANGAEA (Ecology)", |
68 | "type": "organization" | 68 | "type": "organization" | ||
69 | }, | 69 | }, | ||
n | 70 | "owner_org": "3226ef9c-20d1-43fd-ba8f-fa35c8c9fb5d", | n | 70 | "owner_org": "c2816fc6-b5ce-42c9-b5a4-11709b658b82", |
71 | "private": false, | 71 | "private": false, | ||
72 | "publication_year": "2013", | 72 | "publication_year": "2013", | ||
73 | "related_identifiers": [ | 73 | "related_identifiers": [ | ||
74 | { | 74 | { | ||
75 | "authors": "Krause Evamaria,Wichels Antje,Gim\u00e9nez | 75 | "authors": "Krause Evamaria,Wichels Antje,Gim\u00e9nez | ||
76 | Luis,Gerdts Gunnar", | 76 | Luis,Gerdts Gunnar", | ||
77 | "email_authors": | 77 | "email_authors": | ||
78 | web.de,antje.wichels@awi.de,Luis.Gimenez@awi.de,Gunnar.Gerdts@awi.de", | 78 | web.de,antje.wichels@awi.de,Luis.Gimenez@awi.de,Gunnar.Gerdts@awi.de", | ||
79 | "identifier": "https://doi.org/10.3354/ame01622", | 79 | "identifier": "https://doi.org/10.3354/ame01622", | ||
80 | "identifier_type": "DOI", | 80 | "identifier_type": "DOI", | ||
81 | "orcid_authors": | 81 | "orcid_authors": | ||
82 | "0000-0002-4946-6544,0000-0002-2060-1845,,0000-0003-0872-3927", | 82 | "0000-0002-4946-6544,0000-0002-2060-1845,,0000-0003-0872-3927", | ||
83 | "relation_type": "IsSupplementTo", | 83 | "relation_type": "IsSupplementTo", | ||
84 | "source": "Aquatic Microbial Ecology", | 84 | "source": "Aquatic Microbial Ecology", | ||
85 | "title": "Marine fungi may benefit from ocean acidification", | 85 | "title": "Marine fungi may benefit from ocean acidification", | ||
86 | "year": "2013" | 86 | "year": "2013" | ||
87 | }, | 87 | }, | ||
88 | { | 88 | { | ||
89 | "authors": "Lavigne H\u00e9lo\u00efse,Gattuso Jean-Pierre", | 89 | "authors": "Lavigne H\u00e9lo\u00efse,Gattuso Jean-Pierre", | ||
90 | "email_authors": | 90 | "email_authors": | ||
91 | "hlavigne@naturalsciences.be,jean-pierre.gattuso@imev-mer.fr", | 91 | "hlavigne@naturalsciences.be,jean-pierre.gattuso@imev-mer.fr", | ||
92 | "identifier": "https://cran.r-project.org/package=seacarb", | 92 | "identifier": "https://cran.r-project.org/package=seacarb", | ||
93 | "identifier_type": "DOI", | 93 | "identifier_type": "DOI", | ||
94 | "orcid_authors": ",0000-0002-4533-4114", | 94 | "orcid_authors": ",0000-0002-4533-4114", | ||
95 | "relation_type": "References", | 95 | "relation_type": "References", | ||
96 | "source": "", | 96 | "source": "", | ||
97 | "title": "seacarb: seawater carbonate chemistry with R. R | 97 | "title": "seacarb: seawater carbonate chemistry with R. R | ||
98 | package version 2.4", | 98 | package version 2.4", | ||
99 | "year": "2011" | 99 | "year": "2011" | ||
100 | } | 100 | } | ||
101 | ], | 101 | ], | ||
102 | "relationships_as_object": [], | 102 | "relationships_as_object": [], | ||
103 | "relationships_as_subject": [], | 103 | "relationships_as_subject": [], | ||
104 | "repository_name": "PANGAEA (Data Publisher for Earth & | 104 | "repository_name": "PANGAEA (Data Publisher for Earth & | ||
105 | Environmental Science)", | 105 | Environmental Science)", | ||
106 | "resource_type": "text/tab-separated-values - filename: | 106 | "resource_type": "text/tab-separated-values - filename: | ||
107 | krause_fungi", | 107 | krause_fungi", | ||
108 | "resources": [], | 108 | "resources": [], | ||
109 | "source_metadata_created": "2013", | 109 | "source_metadata_created": "2013", | ||
110 | "source_metadata_modified": "", | 110 | "source_metadata_modified": "", | ||
111 | "state": "active", | 111 | "state": "active", | ||
112 | "subject_areas": [ | 112 | "subject_areas": [ | ||
113 | { | 113 | { | ||
114 | "subject_area_additional": "", | 114 | "subject_area_additional": "", | ||
115 | "subject_area_name": "Biosphere" | 115 | "subject_area_name": "Biosphere" | ||
116 | }, | 116 | }, | ||
117 | { | 117 | { | ||
118 | "subject_area_additional": "", | 118 | "subject_area_additional": "", | ||
119 | "subject_area_name": "Chemistry" | 119 | "subject_area_name": "Chemistry" | ||
120 | }, | 120 | }, | ||
121 | { | 121 | { | ||
122 | "subject_area_additional": "", | 122 | "subject_area_additional": "", | ||
123 | "subject_area_name": "Ecology" | 123 | "subject_area_name": "Ecology" | ||
124 | }, | 124 | }, | ||
125 | { | 125 | { | ||
126 | "subject_area_additional": "", | 126 | "subject_area_additional": "", | ||
127 | "subject_area_name": "Oceans" | 127 | "subject_area_name": "Oceans" | ||
128 | } | 128 | } | ||
129 | ], | 129 | ], | ||
130 | "tags": [ | 130 | "tags": [ | ||
131 | { | 131 | { | ||
t | t | 132 | "display_name": "Aquaria 20 L", | ||
133 | "id": "62c412c1-2294-406a-ad79-183330400def", | ||||
134 | "name": "Aquaria 20 L", | ||||
135 | "state": "active", | ||||
136 | "vocabulary_id": null | ||||
137 | }, | ||||
138 | { | ||||
132 | "display_name": "Bottles or small containers-Aquaria 20 L", | 139 | "display_name": "Bottles or small containers", | ||
133 | "id": "be154617-73a3-4ed4-b54f-69e22323c12a", | 140 | "id": "ba227243-af91-4efc-8086-790112e90e09", | ||
134 | "name": "Bottles or small containers-Aquaria 20 L", | 141 | "name": "Bottles or small containers", | ||
135 | "state": "active", | 142 | "state": "active", | ||
136 | "vocabulary_id": null | 143 | "vocabulary_id": null | ||
137 | }, | 144 | }, | ||
138 | { | 145 | { | ||
139 | "display_name": "Coast and continental shelf", | 146 | "display_name": "Coast and continental shelf", | ||
140 | "id": "58eb1929-34b5-4fd9-ac44-824f0e51de40", | 147 | "id": "58eb1929-34b5-4fd9-ac44-824f0e51de40", | ||
141 | "name": "Coast and continental shelf", | 148 | "name": "Coast and continental shelf", | ||
142 | "state": "active", | 149 | "state": "active", | ||
143 | "vocabulary_id": null | 150 | "vocabulary_id": null | ||
144 | }, | 151 | }, | ||
145 | { | 152 | { | ||
146 | "display_name": "Community composition and diversity", | 153 | "display_name": "Community composition and diversity", | ||
147 | "id": "7579ffcb-0715-49e4-b2d3-fddd764ef3be", | 154 | "id": "7579ffcb-0715-49e4-b2d3-fddd764ef3be", | ||
148 | "name": "Community composition and diversity", | 155 | "name": "Community composition and diversity", | ||
149 | "state": "active", | 156 | "state": "active", | ||
150 | "vocabulary_id": null | 157 | "vocabulary_id": null | ||
151 | }, | 158 | }, | ||
152 | { | 159 | { | ||
153 | "display_name": "Entire community", | 160 | "display_name": "Entire community", | ||
154 | "id": "6e1a8708-bc7c-4fa2-af8d-8a3c7bf9112a", | 161 | "id": "6e1a8708-bc7c-4fa2-af8d-8a3c7bf9112a", | ||
155 | "name": "Entire community", | 162 | "name": "Entire community", | ||
156 | "state": "active", | 163 | "state": "active", | ||
157 | "vocabulary_id": null | 164 | "vocabulary_id": null | ||
158 | }, | 165 | }, | ||
159 | { | 166 | { | ||
160 | "display_name": "Laboratory experiment", | 167 | "display_name": "Laboratory experiment", | ||
161 | "id": "c6c00754-c769-4932-a517-bff2c9512884", | 168 | "id": "c6c00754-c769-4932-a517-bff2c9512884", | ||
162 | "name": "Laboratory experiment", | 169 | "name": "Laboratory experiment", | ||
163 | "state": "active", | 170 | "state": "active", | ||
164 | "vocabulary_id": null | 171 | "vocabulary_id": null | ||
165 | }, | 172 | }, | ||
166 | { | 173 | { | ||
167 | "display_name": "North Atlantic", | 174 | "display_name": "North Atlantic", | ||
168 | "id": "72c150cb-b0a4-479b-a0c5-f23ebb039ab7", | 175 | "id": "72c150cb-b0a4-479b-a0c5-f23ebb039ab7", | ||
169 | "name": "North Atlantic", | 176 | "name": "North Atlantic", | ||
170 | "state": "active", | 177 | "state": "active", | ||
171 | "vocabulary_id": null | 178 | "vocabulary_id": null | ||
172 | }, | 179 | }, | ||
173 | { | 180 | { | ||
174 | "display_name": "Pelagos", | 181 | "display_name": "Pelagos", | ||
175 | "id": "012f5b69-4e75-4f54-8ac4-8bf192cafaa2", | 182 | "id": "012f5b69-4e75-4f54-8ac4-8bf192cafaa2", | ||
176 | "name": "Pelagos", | 183 | "name": "Pelagos", | ||
177 | "state": "active", | 184 | "state": "active", | ||
178 | "vocabulary_id": null | 185 | "vocabulary_id": null | ||
179 | }, | 186 | }, | ||
180 | { | 187 | { | ||
181 | "display_name": "Temperate", | 188 | "display_name": "Temperate", | ||
182 | "id": "31aaeb0c-a4a5-4a8e-9c90-be1eff0cac91", | 189 | "id": "31aaeb0c-a4a5-4a8e-9c90-be1eff0cac91", | ||
183 | "name": "Temperate", | 190 | "name": "Temperate", | ||
184 | "state": "active", | 191 | "state": "active", | ||
185 | "vocabulary_id": null | 192 | "vocabulary_id": null | ||
186 | } | 193 | } | ||
187 | ], | 194 | ], | ||
188 | "title": "Experiment: Marine fungi may benefit from ocean | 195 | "title": "Experiment: Marine fungi may benefit from ocean | ||
189 | acidification", | 196 | acidification", | ||
190 | "type": "vdataset", | 197 | "type": "vdataset", | ||
191 | "url": "https://doi.org/10.1594/PANGAEA.831726" | 198 | "url": "https://doi.org/10.1594/PANGAEA.831726" | ||
192 | } | 199 | } |