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Translation Framework for Chemical Reaction Networks
The dataset used in this paper is a collection of biochemical reaction networks with special topologies, called weak reversibility (WR) and zero deficiency (ZD), and their... -
Atoms of multistationarity in chemical reaction networks
A dataset of labelled fully open networks with no positive feedback loops, used to generate non-multistationary networks. -
Designing Machine Learning Tools to Characterize Multistationarity of Fully O...
A large dataset of labelled fully open CRNs whose production necessitated the development of new CRN theory. -
Thermodynamics of growth in open chemical reaction networks
The dataset used in the paper to analyze the thermodynamics of growth in open chemical reaction networks. -
Elementary Flux Modes as CRN Gears for Free Energy Transduction
The dataset contains elementary flux modes (EFMs) for a chemical reaction network (CRN) engaged in energy transduction. -
REACTMINE: A Statistical Search Algorithm for Inferring Chemical Reactions fr...
Inferring chemical reaction networks (CRN) from concentration time series is a challenge encouraged by the growing availability of quantitative temporal data at the cellular level.
