8 datasets found

Groups: Protein-Protein Interactions Formats: JSON

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  • STRING database

    STRING is a comprehensive protein-protein interaction database that includes experimental data from various sources.
  • Protein Structure Data from PDB

    The dataset used in this study is a collection of protein structure data from the Protein Data Bank (PDB), which is used to infer the interactions between protein subunits.
  • Protein-Protein Interactions (PPI) dataset

    The Protein-Protein Interactions (PPI) dataset is a subgraph of the PPI network for Homo sapiens.
  • HuRI-PPI

    The dataset contains 5,604 proteins and 23,322 interactions generated by multiple orthogonal high-throughput yeast two-hybrid screens.
  • SARS-CoV-2 RBD binding affinity dataset

    The dataset used in the paper for predicting the effects of mutations on protein-protein binding.
  • SKEMPI2 dataset

    The dataset used in the paper for predicting mutational effects on protein-protein binding.
  • BioGRID

    The dataset used for training the PPI transformer network, containing 31,869 experimentally-validated positive virus-human interactions and 34,836 negative interactions.
  • AIMed dataset

    The AIMed dataset includes more than 2,000 text segments from PubMed abstracts in which protein-protein interactions are annotated.