Unmodified foraminiferal raw eDNA data in form of 'reads' with ASV, OTU and taxonomic assignations from sediment surface samples at stations REF, IF20-12, IF20-10, IF20-18, IF20-01 and IF20-04

doi:doi:10.1594/PANGAEA.965589

Unmodified foraminiferal raw eDNA data in form of 'reads' with ASV, OTU and taxonomic assignations from sediment surface samples at stations REF, IF20-12, IF20-10, IF20-18, IF20-01 and IF20-04

The eDNA analysis was done using a DNeasy® PowerLyzer PowerSoil Kit (QIAGEN), processed using the DADA2 pipeline and the taxonomic assignations were estimated using a sequence bank at ID-Gene ecodiagnostics lab in Geneva Switzerland.

BibTex:

@dataset{O'Brien_Phoebe_Alexandra_Joy_and_Barrenechea_Angeles_Ines_and_Cermakova_Kristina_and_Jarrossay_Renaud_and_Polovodova_Asteman_Irina_2024,
    abstract = {The eDNA analysis was done using a DNeasy® PowerLyzer PowerSoil Kit (QIAGEN), processed using the DADA2 pipeline and the taxonomic assignations were estimated using a sequence bank at ID-Gene ecodiagnostics lab in Geneva Switzerland.},
    author = {O'Brien, Phoebe Alexandra Joy and Barrenechea Angeles, Ines and Cermakova, Kristina and Jarrossay, Renaud and Polovodova Asteman, Irina},
    doi = {10.1594/PANGAEA.965589},
    institution = {PANGAEA (Chemistry)},
    keyword = {'Foraminiferal assemblages', 'Pollutants', 'eDNA metabarcoding', 'heavy metals'},
    month = {dec},
    title = {Unmodified foraminiferal raw eDNA data in form of 'reads' with ASV, OTU and taxonomic assignations from sediment surface samples at stations REF, IF20-12, IF20-10, IF20-18, IF20-01 and IF20-04},
    url = {https://service.tib.eu/ldmservice/vdataset/png-doi-10-1594-pangaea-965589},
    year = {2024}
}