Changes
On November 30, 2024 at 10:44:39 AM UTC, admin:
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Moved Seawater carbonate chemistry and growth and chlorophyll, photochemical parameters, carbon fixation of diatom Phaeodactylum tricornutum from organization PANGAEA (Biosphere) to organization PANGAEA (Ecology)
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Removed the following tags from Seawater carbonate chemistry and growth and chlorophyll, photochemical parameters, carbon fixation of diatom Phaeodactylum tricornutum
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Added the following tags to Seawater carbonate chemistry and growth and chlorophyll, photochemical parameters, carbon fixation of diatom Phaeodactylum tricornutum
f | 1 | { | f | 1 | { |
2 | "author": "Liu, Nana", | 2 | "author": "Liu, Nana", | ||
3 | "author_email": "", | 3 | "author_email": "", | ||
4 | "citation": [], | 4 | "citation": [], | ||
5 | "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700", | 5 | "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700", | ||
6 | "doi": "10.1594/PANGAEA.900658", | 6 | "doi": "10.1594/PANGAEA.900658", | ||
7 | "doi_date_published": "2017", | 7 | "doi_date_published": "2017", | ||
8 | "doi_publisher": "", | 8 | "doi_publisher": "", | ||
9 | "doi_status": "True", | 9 | "doi_status": "True", | ||
10 | "extra_authors": [ | 10 | "extra_authors": [ | ||
11 | { | 11 | { | ||
12 | "extra_author": "Beardall, John", | 12 | "extra_author": "Beardall, John", | ||
13 | "familyName": "Beardall", | 13 | "familyName": "Beardall", | ||
14 | "givenName": "John", | 14 | "givenName": "John", | ||
15 | "orcid": "0000-0001-7684-446X" | 15 | "orcid": "0000-0001-7684-446X" | ||
16 | }, | 16 | }, | ||
17 | { | 17 | { | ||
18 | "extra_author": "Gao, Kunshan", | 18 | "extra_author": "Gao, Kunshan", | ||
19 | "familyName": "Gao", | 19 | "familyName": "Gao", | ||
20 | "givenName": "Kunshan", | 20 | "givenName": "Kunshan", | ||
21 | "orcid": "0000-0001-7365-6332" | 21 | "orcid": "0000-0001-7365-6332" | ||
22 | } | 22 | } | ||
23 | ], | 23 | ], | ||
24 | "familyName": "Liu", | 24 | "familyName": "Liu", | ||
25 | "givenName": "Nana", | 25 | "givenName": "Nana", | ||
26 | "groups": [], | 26 | "groups": [], | ||
27 | "id": "6d94689c-2e16-49d0-b25f-d0c10939da23", | 27 | "id": "6d94689c-2e16-49d0-b25f-d0c10939da23", | ||
28 | "isopen": false, | 28 | "isopen": false, | ||
29 | "license_id": "CC-BY-4.0", | 29 | "license_id": "CC-BY-4.0", | ||
30 | "license_title": "CC-BY-4.0", | 30 | "license_title": "CC-BY-4.0", | ||
31 | "metadata_created": "2024-11-29T11:46:12.327756", | 31 | "metadata_created": "2024-11-29T11:46:12.327756", | ||
n | 32 | "metadata_modified": "2024-11-29T11:46:12.327762", | n | 32 | "metadata_modified": "2024-11-30T10:44:39.564846", |
33 | "name": "png-doi-10-1594-pangaea-900658", | 33 | "name": "png-doi-10-1594-pangaea-900658", | ||
34 | "notes": "Elevated CO2 is leading to a decrease in pH in marine | 34 | "notes": "Elevated CO2 is leading to a decrease in pH in marine | ||
35 | environments (ocean acidification [OA]), altering marine carbonate | 35 | environments (ocean acidification [OA]), altering marine carbonate | ||
36 | chemistry. OA can influence the metabolism of many marine organisms; | 36 | chemistry. OA can influence the metabolism of many marine organisms; | ||
37 | however, no consensus has been reached on its effects on algal | 37 | however, no consensus has been reached on its effects on algal | ||
38 | photosynthetic carbon fixation and primary production. Here, we found | 38 | photosynthetic carbon fixation and primary production. Here, we found | ||
39 | that when the diatom Phaeodactylum tricornutum was grown under | 39 | that when the diatom Phaeodactylum tricornutum was grown under | ||
40 | different pCO2 levels, it showed different responses to elevated pCO2 | 40 | different pCO2 levels, it showed different responses to elevated pCO2 | ||
41 | levels under growth-limiting (20 \u00b5mol photons/m**2/s, LL) | 41 | levels under growth-limiting (20 \u00b5mol photons/m**2/s, LL) | ||
42 | compared with growth-saturating (200 \u00b5mol photons/m**2/s, HL) | 42 | compared with growth-saturating (200 \u00b5mol photons/m**2/s, HL) | ||
43 | light levels. With pCO2 increased up to 950 \u00b5atm, growth rates | 43 | light levels. With pCO2 increased up to 950 \u00b5atm, growth rates | ||
44 | and primary productivity increased, but in the HL cells, these | 44 | and primary productivity increased, but in the HL cells, these | ||
45 | parameters decreased significantly at higher concentrations up to 5000 | 45 | parameters decreased significantly at higher concentrations up to 5000 | ||
46 | \u00b5atm, while no difference in growth was observed with pCO2 for | 46 | \u00b5atm, while no difference in growth was observed with pCO2 for | ||
47 | the LL cells. Elevated CO2 concentrations reduced the size of the | 47 | the LL cells. Elevated CO2 concentrations reduced the size of the | ||
48 | intracellular dissolved inorganic carbon (DIC) pool by 81% and 60% | 48 | intracellular dissolved inorganic carbon (DIC) pool by 81% and 60% | ||
49 | under the LL and HL levels, respectively, with the corresponding | 49 | under the LL and HL levels, respectively, with the corresponding | ||
50 | photosynthetic affinity for DIC decreasing by 48% and 55%. Little | 50 | photosynthetic affinity for DIC decreasing by 48% and 55%. Little | ||
51 | photoinhibition was observed across all treatments. These results | 51 | photoinhibition was observed across all treatments. These results | ||
52 | suggest that the decreased growth rates under higher CO2 levels in the | 52 | suggest that the decreased growth rates under higher CO2 levels in the | ||
53 | HL cells were most likely due to acid stress. Low energy demand of | 53 | HL cells were most likely due to acid stress. Low energy demand of | ||
54 | growth and energy saving from the down-regulation of the CO2 | 54 | growth and energy saving from the down-regulation of the CO2 | ||
55 | concentrating mechanisms (CCM) minimized the effects of acid stress on | 55 | concentrating mechanisms (CCM) minimized the effects of acid stress on | ||
56 | the growth of the LL cells. These findings imply that OA treatment, | 56 | the growth of the LL cells. These findings imply that OA treatment, | ||
57 | except for down-regulating CCM, caused stress on the diatom, reflected | 57 | except for down-regulating CCM, caused stress on the diatom, reflected | ||
58 | in diminished C assimilation and growth rates.", | 58 | in diminished C assimilation and growth rates.", | ||
59 | "num_resources": 0, | 59 | "num_resources": 0, | ||
n | 60 | "num_tags": 12, | n | 60 | "num_tags": 15, |
61 | "orcid": "", | 61 | "orcid": "", | ||
62 | "organization": { | 62 | "organization": { | ||
63 | "approval_status": "approved", | 63 | "approval_status": "approved", | ||
n | 64 | "created": "2024-11-29T11:32:00.143130", | n | 64 | "created": "2024-11-30T10:25:26.439072", |
65 | "description": "PANGAEA (Data Publisher for Earth & Environmental | 65 | "description": "PANGAEA (Data Publisher for Earth & Environmental | ||
66 | Science): The information system PANGAEA is operated as an Open Access | 66 | Science): The information system PANGAEA is operated as an Open Access | ||
67 | library aimed at archiving, publishing and distributing georeferenced | 67 | library aimed at archiving, publishing and distributing georeferenced | ||
68 | data from earth system research. PANGAEA guarantees long-term | 68 | data from earth system research. PANGAEA guarantees long-term | ||
69 | availability (greater than 10 years) of its content. PANGAEA is open | 69 | availability (greater than 10 years) of its content. PANGAEA is open | ||
70 | to any project, institution, or individual scientist to use or to | 70 | to any project, institution, or individual scientist to use or to | ||
71 | archive and publish data. PANGAEA focuses on georeferenced | 71 | archive and publish data. PANGAEA focuses on georeferenced | ||
72 | observational data, experimental data, and models/simulations. | 72 | observational data, experimental data, and models/simulations. | ||
73 | Citability, comprehensive metadata descriptions, interoperability of | 73 | Citability, comprehensive metadata descriptions, interoperability of | ||
74 | data and metadata, a high degree of structural and semantic | 74 | data and metadata, a high degree of structural and semantic | ||
75 | harmonization of the data inventory as well as the commitment of the | 75 | harmonization of the data inventory as well as the commitment of the | ||
76 | hosting institutions ensures FAIRness of archived data.", | 76 | hosting institutions ensures FAIRness of archived data.", | ||
n | 77 | "id": "3226ef9c-20d1-43fd-ba8f-fa35c8c9fb5d", | n | 77 | "id": "c2816fc6-b5ce-42c9-b5a4-11709b658b82", |
78 | "image_url": "pangaea_topicbiosphere.png", | 78 | "image_url": "pangaea_topicecology.png", | ||
79 | "is_organization": true, | 79 | "is_organization": true, | ||
n | 80 | "name": "pangaea_biosphere", | n | 80 | "name": "pangaea_ecology", |
81 | "state": "active", | 81 | "state": "active", | ||
n | 82 | "title": "PANGAEA (Biosphere)", | n | 82 | "title": "PANGAEA (Ecology)", |
83 | "type": "organization" | 83 | "type": "organization" | ||
84 | }, | 84 | }, | ||
n | 85 | "owner_org": "3226ef9c-20d1-43fd-ba8f-fa35c8c9fb5d", | n | 85 | "owner_org": "c2816fc6-b5ce-42c9-b5a4-11709b658b82", |
86 | "private": false, | 86 | "private": false, | ||
87 | "publication_year": "2017", | 87 | "publication_year": "2017", | ||
88 | "related_identifiers": [ | 88 | "related_identifiers": [ | ||
89 | { | 89 | { | ||
90 | "authors": "Liu Nana,Beardall John,Gao Kunshan", | 90 | "authors": "Liu Nana,Beardall John,Gao Kunshan", | ||
91 | "email_authors": "nnliu@im.ac.cn,,ksgao@xmu.edu.cn", | 91 | "email_authors": "nnliu@im.ac.cn,,ksgao@xmu.edu.cn", | ||
92 | "identifier": "https://doi.org/10.3354/ame01820", | 92 | "identifier": "https://doi.org/10.3354/ame01820", | ||
93 | "identifier_type": "DOI", | 93 | "identifier_type": "DOI", | ||
94 | "orcid_authors": ",0000-0001-7684-446X,0000-0001-7365-6332", | 94 | "orcid_authors": ",0000-0001-7684-446X,0000-0001-7365-6332", | ||
95 | "relation_type": "IsSupplementTo", | 95 | "relation_type": "IsSupplementTo", | ||
96 | "source": "Aquatic Microbial Ecology", | 96 | "source": "Aquatic Microbial Ecology", | ||
97 | "title": "Elevated CO2 and associated seawater chemistry do not | 97 | "title": "Elevated CO2 and associated seawater chemistry do not | ||
98 | benefit a model diatom grown with increased availability of light", | 98 | benefit a model diatom grown with increased availability of light", | ||
99 | "year": "2017" | 99 | "year": "2017" | ||
100 | }, | 100 | }, | ||
101 | { | 101 | { | ||
102 | "authors": "Gattuso Jean-Pierre,Epitalon Jean-Marie,Lavigne | 102 | "authors": "Gattuso Jean-Pierre,Epitalon Jean-Marie,Lavigne | ||
103 | H\u00e9lo\u00efse,Orr James C,Gentili Bernard,Proye | 103 | H\u00e9lo\u00efse,Orr James C,Gentili Bernard,Proye | ||
104 | Aur\u00e9lien,Soetaert Karline,Rae James", | 104 | Aur\u00e9lien,Soetaert Karline,Rae James", | ||
105 | "email_authors": | 105 | "email_authors": | ||
106 | ,j.orr@iaea.org,bernard.gentili@orange.fr,,karline.soetaert@nioz.nl,", | 106 | ,j.orr@iaea.org,bernard.gentili@orange.fr,,karline.soetaert@nioz.nl,", | ||
107 | "identifier": "https://cran.r-project.org/package=seacarb", | 107 | "identifier": "https://cran.r-project.org/package=seacarb", | ||
108 | "identifier_type": "DOI", | 108 | "identifier_type": "DOI", | ||
109 | "orcid_authors": | 109 | "orcid_authors": | ||
110 | 4114,,,0000-0002-8707-7080,,,0000-0003-4603-7100,0000-0003-3904-2526", | 110 | 4114,,,0000-0002-8707-7080,,,0000-0003-4603-7100,0000-0003-3904-2526", | ||
111 | "relation_type": "References", | 111 | "relation_type": "References", | ||
112 | "source": "", | 112 | "source": "", | ||
113 | "title": "seacarb: seawater carbonate chemistry with R. R | 113 | "title": "seacarb: seawater carbonate chemistry with R. R | ||
114 | package version 3.1", | 114 | package version 3.1", | ||
115 | "year": "2016" | 115 | "year": "2016" | ||
116 | } | 116 | } | ||
117 | ], | 117 | ], | ||
118 | "relationships_as_object": [], | 118 | "relationships_as_object": [], | ||
119 | "relationships_as_subject": [], | 119 | "relationships_as_subject": [], | ||
120 | "repository_name": "PANGAEA (Data Publisher for Earth & | 120 | "repository_name": "PANGAEA (Data Publisher for Earth & | ||
121 | Environmental Science)", | 121 | Environmental Science)", | ||
122 | "resource_type": "text/tab-separated-values - filename: | 122 | "resource_type": "text/tab-separated-values - filename: | ||
123 | Liu_etal_2018_AME", | 123 | Liu_etal_2018_AME", | ||
124 | "resources": [], | 124 | "resources": [], | ||
125 | "source_metadata_created": "2017", | 125 | "source_metadata_created": "2017", | ||
126 | "source_metadata_modified": "", | 126 | "source_metadata_modified": "", | ||
127 | "state": "active", | 127 | "state": "active", | ||
128 | "subject_areas": [ | 128 | "subject_areas": [ | ||
129 | { | 129 | { | ||
130 | "subject_area_additional": "", | 130 | "subject_area_additional": "", | ||
131 | "subject_area_name": "BiologicalClassification" | 131 | "subject_area_name": "BiologicalClassification" | ||
132 | }, | 132 | }, | ||
133 | { | 133 | { | ||
134 | "subject_area_additional": "", | 134 | "subject_area_additional": "", | ||
135 | "subject_area_name": "Biosphere" | 135 | "subject_area_name": "Biosphere" | ||
136 | }, | 136 | }, | ||
137 | { | 137 | { | ||
138 | "subject_area_additional": "", | 138 | "subject_area_additional": "", | ||
139 | "subject_area_name": "Chemistry" | 139 | "subject_area_name": "Chemistry" | ||
140 | }, | 140 | }, | ||
141 | { | 141 | { | ||
142 | "subject_area_additional": "", | 142 | "subject_area_additional": "", | ||
143 | "subject_area_name": "Ecology" | 143 | "subject_area_name": "Ecology" | ||
144 | }, | 144 | }, | ||
145 | { | 145 | { | ||
146 | "subject_area_additional": "", | 146 | "subject_area_additional": "", | ||
147 | "subject_area_name": "Oceans" | 147 | "subject_area_name": "Oceans" | ||
148 | } | 148 | } | ||
149 | ], | 149 | ], | ||
150 | "tags": [ | 150 | "tags": [ | ||
151 | { | 151 | { | ||
n | n | 152 | "display_name": "Aquaria 20 L", | ||
153 | "id": "62c412c1-2294-406a-ad79-183330400def", | ||||
154 | "name": "Aquaria 20 L", | ||||
155 | "state": "active", | ||||
156 | "vocabulary_id": null | ||||
157 | }, | ||||
158 | { | ||||
152 | "display_name": "Bottles or small containers-Aquaria 20 L", | 159 | "display_name": "Bottles or small containers", | ||
153 | "id": "be154617-73a3-4ed4-b54f-69e22323c12a", | 160 | "id": "ba227243-af91-4efc-8086-790112e90e09", | ||
154 | "name": "Bottles or small containers-Aquaria 20 L", | 161 | "name": "Bottles or small containers", | ||
155 | "state": "active", | 162 | "state": "active", | ||
156 | "vocabulary_id": null | 163 | "vocabulary_id": null | ||
157 | }, | 164 | }, | ||
158 | { | 165 | { | ||
159 | "display_name": "Chromista", | 166 | "display_name": "Chromista", | ||
160 | "id": "36ecf721-e11a-4662-8783-da539c625d5c", | 167 | "id": "36ecf721-e11a-4662-8783-da539c625d5c", | ||
161 | "name": "Chromista", | 168 | "name": "Chromista", | ||
162 | "state": "active", | 169 | "state": "active", | ||
163 | "vocabulary_id": null | 170 | "vocabulary_id": null | ||
164 | }, | 171 | }, | ||
165 | { | 172 | { | ||
n | 166 | "display_name": "Growth-Morphology", | n | 173 | "display_name": "Growth", |
167 | "id": "b00c4eac-980d-42b2-bae9-0aa1b212cf54", | 174 | "id": "898cbb0c-ff61-4ca3-9e35-0ef6fbb8eb98", | ||
168 | "name": "Growth-Morphology", | 175 | "name": "Growth", | ||
169 | "state": "active", | 176 | "state": "active", | ||
170 | "vocabulary_id": null | 177 | "vocabulary_id": null | ||
171 | }, | 178 | }, | ||
172 | { | 179 | { | ||
173 | "display_name": "Laboratory experiment", | 180 | "display_name": "Laboratory experiment", | ||
174 | "id": "c6c00754-c769-4932-a517-bff2c9512884", | 181 | "id": "c6c00754-c769-4932-a517-bff2c9512884", | ||
175 | "name": "Laboratory experiment", | 182 | "name": "Laboratory experiment", | ||
176 | "state": "active", | 183 | "state": "active", | ||
177 | "vocabulary_id": null | 184 | "vocabulary_id": null | ||
178 | }, | 185 | }, | ||
179 | { | 186 | { | ||
180 | "display_name": "Laboratory strains", | 187 | "display_name": "Laboratory strains", | ||
181 | "id": "60ce9207-f124-49be-bcc3-809237101388", | 188 | "id": "60ce9207-f124-49be-bcc3-809237101388", | ||
182 | "name": "Laboratory strains", | 189 | "name": "Laboratory strains", | ||
183 | "state": "active", | 190 | "state": "active", | ||
184 | "vocabulary_id": null | 191 | "vocabulary_id": null | ||
185 | }, | 192 | }, | ||
186 | { | 193 | { | ||
187 | "display_name": "Light", | 194 | "display_name": "Light", | ||
188 | "id": "9ac4a69a-37ab-4e4a-9d78-5108602c751e", | 195 | "id": "9ac4a69a-37ab-4e4a-9d78-5108602c751e", | ||
189 | "name": "Light", | 196 | "name": "Light", | ||
190 | "state": "active", | 197 | "state": "active", | ||
191 | "vocabulary_id": null | 198 | "vocabulary_id": null | ||
192 | }, | 199 | }, | ||
193 | { | 200 | { | ||
n | n | 201 | "display_name": "Morphology", | ||
202 | "id": "2345107d-a1a2-43c1-8b38-d670ea499006", | ||||
203 | "name": "Morphology", | ||||
204 | "state": "active", | ||||
205 | "vocabulary_id": null | ||||
206 | }, | ||||
207 | { | ||||
194 | "display_name": "Not applicable", | 208 | "display_name": "Not applicable", | ||
195 | "id": "ff7fc64a-fa65-45cc-8191-258baccab3c7", | 209 | "id": "ff7fc64a-fa65-45cc-8191-258baccab3c7", | ||
196 | "name": "Not applicable", | 210 | "name": "Not applicable", | ||
197 | "state": "active", | 211 | "state": "active", | ||
198 | "vocabulary_id": null | 212 | "vocabulary_id": null | ||
199 | }, | 213 | }, | ||
200 | { | 214 | { | ||
201 | "display_name": "Pelagos", | 215 | "display_name": "Pelagos", | ||
202 | "id": "012f5b69-4e75-4f54-8ac4-8bf192cafaa2", | 216 | "id": "012f5b69-4e75-4f54-8ac4-8bf192cafaa2", | ||
203 | "name": "Pelagos", | 217 | "name": "Pelagos", | ||
204 | "state": "active", | 218 | "state": "active", | ||
205 | "vocabulary_id": null | 219 | "vocabulary_id": null | ||
206 | }, | 220 | }, | ||
207 | { | 221 | { | ||
208 | "display_name": "Phaeodactylum tricornutum", | 222 | "display_name": "Phaeodactylum tricornutum", | ||
209 | "id": "b6012fea-dd25-46ba-83ad-ce717e84aa6d", | 223 | "id": "b6012fea-dd25-46ba-83ad-ce717e84aa6d", | ||
210 | "name": "Phaeodactylum tricornutum", | 224 | "name": "Phaeodactylum tricornutum", | ||
211 | "state": "active", | 225 | "state": "active", | ||
212 | "vocabulary_id": null | 226 | "vocabulary_id": null | ||
213 | }, | 227 | }, | ||
214 | { | 228 | { | ||
n | n | 229 | "display_name": "Photosynthesis", | ||
230 | "id": "ab256517-eb7b-4eed-ad52-64a0ee98fe87", | ||||
231 | "name": "Photosynthesis", | ||||
232 | "state": "active", | ||||
233 | "vocabulary_id": null | ||||
234 | }, | ||||
235 | { | ||||
215 | "display_name": "Phytoplankton", | 236 | "display_name": "Phytoplankton", | ||
216 | "id": "9c357867-c046-43fa-ad3e-39f612d5622b", | 237 | "id": "9c357867-c046-43fa-ad3e-39f612d5622b", | ||
217 | "name": "Phytoplankton", | 238 | "name": "Phytoplankton", | ||
218 | "state": "active", | 239 | "state": "active", | ||
219 | "vocabulary_id": null | 240 | "vocabulary_id": null | ||
220 | }, | 241 | }, | ||
221 | { | 242 | { | ||
t | 222 | "display_name": "Primary production-Photosynthesis", | t | 243 | "display_name": "Primary production", |
223 | "id": "446160f8-ac15-4da8-a39f-79b6c421e396", | 244 | "id": "aca6914d-a728-406d-a5b9-dd9593c21e4e", | ||
224 | "name": "Primary production-Photosynthesis", | 245 | "name": "Primary production", | ||
225 | "state": "active", | 246 | "state": "active", | ||
226 | "vocabulary_id": null | 247 | "vocabulary_id": null | ||
227 | }, | 248 | }, | ||
228 | { | 249 | { | ||
229 | "display_name": "Single species", | 250 | "display_name": "Single species", | ||
230 | "id": "88de69be-3bdd-4cf8-b6a1-386d72c5888d", | 251 | "id": "88de69be-3bdd-4cf8-b6a1-386d72c5888d", | ||
231 | "name": "Single species", | 252 | "name": "Single species", | ||
232 | "state": "active", | 253 | "state": "active", | ||
233 | "vocabulary_id": null | 254 | "vocabulary_id": null | ||
234 | } | 255 | } | ||
235 | ], | 256 | ], | ||
236 | "title": "Seawater carbonate chemistry and growth and chlorophyll, | 257 | "title": "Seawater carbonate chemistry and growth and chlorophyll, | ||
237 | photochemical parameters, carbon fixation of diatom Phaeodactylum | 258 | photochemical parameters, carbon fixation of diatom Phaeodactylum | ||
238 | tricornutum", | 259 | tricornutum", | ||
239 | "type": "vdataset", | 260 | "type": "vdataset", | ||
240 | "url": "https://doi.org/10.1594/PANGAEA.900658" | 261 | "url": "https://doi.org/10.1594/PANGAEA.900658" | ||
241 | } | 262 | } |