Abundance, cell volume, biomass, viability and leucine incorporation rates of prokaryotes in the tropical and subtropical Atlantic

This dataset contains the results of the characterisation of the prokaryotic community by flow cytometry and tritiated leucine incorporation from the MAFIA cruise (Migrants and Active Flux In the Atlantic ocean). Samples were collected in the tropical and subtropical Atlantic during the MAFIA cruise (April 2015) on board the BIO Hespérides. Seawater samples were collected at 13 stations (from the Brazilian coast to the Canary Islands), from the surface down to 3500 m, using a General Oceanics oceanographic rosette equipped with 24 l PVC Niskin bottles. Abundance and cell characteristics (high nucleic acid content fraction, cell volume, viability) were based on measurements performed with a FACSCalibur (Becton-Dickinson) flow cytometer. Leucine incorporation rates were estimated with tritiated leucine (Kirchman et al. 1985) using centrifugation and filtration methods (Smith and Azam 1992). The aim of this dataset was to estimate the influence of surface productivity on the standing stock, characteristics and activity (as leucine incorporation) of prokaryotes across the water column.

Data and Resources

This dataset has no data

Cite this as

Gómez-Letona, Markel, Arístegui, Javier, Hernández-Hernández, Nauzet, Pérez-Lorenzo, Maria, Alvarez-Salgado, Xose Anton, Teira, Eva, Sebastian, Marta (2022). Dataset: Abundance, cell volume, biomass, viability and leucine incorporation rates of prokaryotes in the tropical and subtropical Atlantic. https://doi.org/10.1594/PANGAEA.943414

DOI retrieved: 2022

Additional Info

Field Value
Imported on November 30, 2024
Last update November 30, 2024
License CC-BY-4.0
Source https://doi.org/10.1594/PANGAEA.943414
Author Gómez-Letona, Markel
Given Name Markel
Family Name Gómez-Letona
More Authors
Arístegui, Javier
Hernández-Hernández, Nauzet
Pérez-Lorenzo, Maria
Alvarez-Salgado, Xose Anton
Teira, Eva
Sebastian, Marta
Source Creation 2022
Publication Year 2022
Resource Type text/tab-separated-values - filename: Prokaryotes
Subject Areas
Name: Chemistry

Name: Oceans

Related Identifiers
Title: Surface productivity gradients govern changes in the viability of deep ocean prokaryotes across the tropical and subtropical Atlantic
Identifier: https://doi.org/10.1002/lno.12248
Type: DOI
Relation: References
Year: 2022
Source: Limnology and Oceanography
Authors: Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Alvarez-Salgado Xose Anton , Teira Eva , Sebastian Marta , Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Álvarez‐Salgado Xosé Antón , Teira Eva , Sebastián M A , Calvo-Díaz Alejandra , Morán Xosé Anxelu G , Falcioni Tania , Papa Stefano , Gasol Josep M , Hernández-León Santiago , UTM-CSIC , Kirchman David L , K'nees E , Hodson Robert E , Lebaron P , Servais Pierre , Agogué Helene , Courties C , Joux Fabien , Norland Svein , Smith David Charles , Azam Farooq .

Title: Surface productivity gradients govern changes in abundance and physiological status of deep ocean prokaryotes across the tropical and subtropical Atlantic
Identifier: https://doi.org/10.1101/2022.06.20.496789
Type: DOI
Relation: References
Source: bioRxiv
Authors: Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Alvarez-Salgado Xose Anton , Teira Eva , Sebastian Marta , Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Álvarez‐Salgado Xosé Antón , Teira Eva , Sebastián M A , Calvo-Díaz Alejandra , Morán Xosé Anxelu G , Falcioni Tania , Papa Stefano , Gasol Josep M , Hernández-León Santiago , UTM-CSIC , Kirchman David L , K'nees E , Hodson Robert E , Lebaron P , Servais Pierre , Agogué Helene , Courties C , Joux Fabien , Norland Svein , Smith David Charles , Azam Farooq .

Title: Seasonal dynamics of picoplankton in shelf waters of the southern Bay of Biscay
Identifier: https://doi.org/10.3354/ame042159
Type: DOI
Relation: References
Year: 2006
Source: Aquatic Microbial Ecology
Authors: Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Alvarez-Salgado Xose Anton , Teira Eva , Sebastian Marta , Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Álvarez‐Salgado Xosé Antón , Teira Eva , Sebastián M A , Calvo-Díaz Alejandra , Morán Xosé Anxelu G , Falcioni Tania , Papa Stefano , Gasol Josep M , Hernández-León Santiago , UTM-CSIC , Kirchman David L , K'nees E , Hodson Robert E , Lebaron P , Servais Pierre , Agogué Helene , Courties C , Joux Fabien , Norland Svein , Smith David Charles , Azam Farooq .

Title: Evaluating the Flow-Cytometric Nucleic Acid Double-Staining Protocol in Realistic Situations of Planktonic Bacterial Death
Identifier: https://doi.org/10.1128/AEM.01668-07
Type: DOI
Relation: References
Year: 2008
Source: Applied and Environmental Microbiology
Authors: Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Alvarez-Salgado Xose Anton , Teira Eva , Sebastian Marta , Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Álvarez‐Salgado Xosé Antón , Teira Eva , Sebastián M A , Calvo-Díaz Alejandra , Morán Xosé Anxelu G , Falcioni Tania , Papa Stefano , Gasol Josep M , Hernández-León Santiago , UTM-CSIC , Kirchman David L , K'nees E , Hodson Robert E , Lebaron P , Servais Pierre , Agogué Helene , Courties C , Joux Fabien , Norland Svein , Smith David Charles , Azam Farooq .

Title: MAFIA Cruise, RV Hespérides
Identifier: https://doi.org/10.20351/29HE20150403
Type: DOI
Relation: References
Year: 2018
Source: UTM-CSIC
Authors: Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Alvarez-Salgado Xose Anton , Teira Eva , Sebastian Marta , Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Álvarez‐Salgado Xosé Antón , Teira Eva , Sebastián M A , Calvo-Díaz Alejandra , Morán Xosé Anxelu G , Falcioni Tania , Papa Stefano , Gasol Josep M , Hernández-León Santiago , UTM-CSIC , Kirchman David L , K'nees E , Hodson Robert E , Lebaron P , Servais Pierre , Agogué Helene , Courties C , Joux Fabien , Norland Svein , Smith David Charles , Azam Farooq .

Title: Leucine incorporation and its potential as a measure of protein synthesis by bacteria in natural aquatic systems
Identifier: https://doi.org/10.1128/aem.49.3.599-607.1985
Type: DOI
Relation: References
Year: 1985
Source: Applied and Environmental Microbiology
Authors: Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Alvarez-Salgado Xose Anton , Teira Eva , Sebastian Marta , Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Álvarez‐Salgado Xosé Antón , Teira Eva , Sebastián M A , Calvo-Díaz Alejandra , Morán Xosé Anxelu G , Falcioni Tania , Papa Stefano , Gasol Josep M , Hernández-León Santiago , UTM-CSIC , Kirchman David L , K'nees E , Hodson Robert E , Lebaron P , Servais Pierre , Agogué Helene , Courties C , Joux Fabien , Norland Svein , Smith David Charles , Azam Farooq .

Title: Does the High Nucleic Acid Content of Individual Bacterial Cells Allow Us To Discriminate between Active Cells and Inactive Cells in Aquatic Systems?
Identifier: https://doi.org/10.1128/AEM.67.4.1775-1782.2001
Type: DOI
Relation: References
Year: 2001
Source: Applied and Environmental Microbiology
Authors: Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Alvarez-Salgado Xose Anton , Teira Eva , Sebastian Marta , Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Álvarez‐Salgado Xosé Antón , Teira Eva , Sebastián M A , Calvo-Díaz Alejandra , Morán Xosé Anxelu G , Falcioni Tania , Papa Stefano , Gasol Josep M , Hernández-León Santiago , UTM-CSIC , Kirchman David L , K'nees E , Hodson Robert E , Lebaron P , Servais Pierre , Agogué Helene , Courties C , Joux Fabien , Norland Svein , Smith David Charles , Azam Farooq .

Title: The relationship between biomass and volume of bacteria
Type: DOI
Relation: References
Year: 1993
Source: In: PF Kemp, BF Sherr, EB Sherr, and JJ Cole [eds.], Handbook of Methods in Aquatic Microbial Ecology, 1st edition, Lewis Publishers
Authors: Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Alvarez-Salgado Xose Anton , Teira Eva , Sebastian Marta , Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Álvarez‐Salgado Xosé Antón , Teira Eva , Sebastián M A , Calvo-Díaz Alejandra , Morán Xosé Anxelu G , Falcioni Tania , Papa Stefano , Gasol Josep M , Hernández-León Santiago , UTM-CSIC , Kirchman David L , K'nees E , Hodson Robert E , Lebaron P , Servais Pierre , Agogué Helene , Courties C , Joux Fabien , Norland Svein , Smith David Charles , Azam Farooq .

Title: A simple, economical method for measuring bacterial protein synthesis rates in seawater using 3H-leucine
Type: DOI
Relation: References
Year: 1992
Source: Marine Microbial Food Webs
Authors: Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Alvarez-Salgado Xose Anton , Teira Eva , Sebastian Marta , Gómez-Letona Markel , Arístegui Javier , Hernández-Hernández Nauzet , Pérez-Lorenzo Maria , Álvarez‐Salgado Xosé Antón , Teira Eva , Sebastián M A , Calvo-Díaz Alejandra , Morán Xosé Anxelu G , Falcioni Tania , Papa Stefano , Gasol Josep M , Hernández-León Santiago , UTM-CSIC , Kirchman David L , K'nees E , Hodson Robert E , Lebaron P , Servais Pierre , Agogué Helene , Courties C , Joux Fabien , Norland Svein , Smith David Charles , Azam Farooq .