Flow cytometry data of phytoplankton, bacteria and viruses obtained for samples collected during the Tara Pacific Expedition 2016-2018

The Tara Pacific expedition (2016-2018) sampled coral ecosystems around 32 islands in the Pacific Ocean, and sampled the surface of oceanic waters at 249 locations, resulting in the collection of nearly 58,000 samples. The expedition was designed to systematically study corals, fish, plankton, and seawater, and included the collection of samples for advanced biogeochemical, molecular, and imaging analysis. Here we provide flow cytometry data obtained for pico- and nano-phytoplankton, bacteria and viruses. Samples were fixed with Glutaraldehyde, kept onboard in liquid nitrogen and then stored at -80°C back in the laboratory. They were then analyzed unstained for phytoplankton using a FACS Canto II flow cytometer and stained using SYBR Green-I for bacteria and viruses.

Data and Resources

This dataset has no data

Cite this as

Marie, Dominique, Romac, Sarah (2022). Dataset: Flow cytometry data of phytoplankton, bacteria and viruses obtained for samples collected during the Tara Pacific Expedition 2016-2018. https://doi.org/10.1594/PANGAEA.944490

DOI retrieved: 2022

Additional Info

Field Value
Imported on November 30, 2024
Last update November 30, 2024
License CC-BY-4.0
Source https://doi.org/10.1594/PANGAEA.944490
Author Marie, Dominique
Given Name Dominique
Family Name Marie
More Authors
Romac, Sarah
Source Creation 2022
Publication Year 2022
Resource Type text/tab-separated-values - filename: TARA_2016-2018_FCM_raw
Subject Areas
Name: BiologicalClassification

Name: Chemistry

Related Identifiers
Title: Open science resources from the Tara Pacific expedition across coral reef and surface ocean ecosystems
Identifier: https://doi.org/10.1038/s41597-022-01757-w
Type: DOI
Relation: References
Year: 2023
Source: Scientific Data
Authors: Lombard Fabien , Bourdin Guillaume , Pesant Stephane , Agostini Sylvain , Baudena Alberto , Boissin Emilie , Cassar Nicolas , Clampitt Megan , Conan Pascal , Da Silva Ophélie , Dimier Céline , Douville Eric , Elineau A , Fin Jonathan , Flores J Michel , Ghiglione Jean Francois , Hume Benjamin C C , Jalabert Laetitia , John Seth G , Kelly Rachel Lauren , Koren Ilan , Lin Yajuan , Marie Dominique , McMinds Ryan , Meriguet Zoe , Metzl Nicolas , Paz-Garcíax David A , Pedrotti Maria Luiza , Poulain Julie , Pujo-Pay Mireille , Ras Josephine , Reverdin Gilles , Romac Sarah , Rouan Alice , Röttinger Eric , Vardi Assaf , Voolstra Christian R , Moulin Clémentine , Iwankow Guillaume , Banaigs Bernard , Bowler Chris , De Vargas Colomban , Forcioli Didier , Furla Paola , Galand Pierre E , Gilson Eric , Reynaud Stéphanie , Sunagawa Shinichi , Sullivan Matthew B , Thomas Olivier , Troublé Romain , Vega Thurber Rebecca , Wincker Patrick , Zoccola Didier , Allemand Denis , Planes Serge , Boss Emmanuel , Gorsky G , Marie Dominique , Partensky Frédéric , Vaulot Daniel , Brussaard Corina P D .

Title: Enumeration of Phytoplankton, Bacteria, and Viruses in Marine Samples
Identifier: https://doi.org/10.1002/0471142956.cy1111s10
Type: DOI
Relation: References
Year: 1999
Source: Current Protocols in Cytometry
Authors: Lombard Fabien , Bourdin Guillaume , Pesant Stephane , Agostini Sylvain , Baudena Alberto , Boissin Emilie , Cassar Nicolas , Clampitt Megan , Conan Pascal , Da Silva Ophélie , Dimier Céline , Douville Eric , Elineau A , Fin Jonathan , Flores J Michel , Ghiglione Jean Francois , Hume Benjamin C C , Jalabert Laetitia , John Seth G , Kelly Rachel Lauren , Koren Ilan , Lin Yajuan , Marie Dominique , McMinds Ryan , Meriguet Zoe , Metzl Nicolas , Paz-Garcíax David A , Pedrotti Maria Luiza , Poulain Julie , Pujo-Pay Mireille , Ras Josephine , Reverdin Gilles , Romac Sarah , Rouan Alice , Röttinger Eric , Vardi Assaf , Voolstra Christian R , Moulin Clémentine , Iwankow Guillaume , Banaigs Bernard , Bowler Chris , De Vargas Colomban , Forcioli Didier , Furla Paola , Galand Pierre E , Gilson Eric , Reynaud Stéphanie , Sunagawa Shinichi , Sullivan Matthew B , Thomas Olivier , Troublé Romain , Vega Thurber Rebecca , Wincker Patrick , Zoccola Didier , Allemand Denis , Planes Serge , Boss Emmanuel , Gorsky G , Marie Dominique , Partensky Frédéric , Vaulot Daniel , Brussaard Corina P D .