Bacterioplankton abundance and heterotrophic production from the Chatham Rise, east of New Zealand, measured during the SalpPOOP (TAN1810) campaign onboard the RV Tangaroa

Heterotrophic bacterioplankton abundance and production was sampled from six to eight depths in the euphotic zone on the SalpPOOp voyage off the east coast of New Zealand in October/November 2018. Duplicate 1.5 ml samples were collected for cell abundance measurements. Samples were preserved with 15 µl of 25% Glutaraldehyde for assessing pico- and nano-phytoeukaryote and heterotrophic bacterioplankton abundances. Samples were kept in the dark for 15 minutes at lab temperature (>8 °C) before being flash-freezing in liquid nitrogen and stored at -80°C. Samples were subsequently analysed on a Beckman-Coulter CytoFLEX S flow cytometer. Bacterioplankton heterotrophic production was estimated from the incorporation of tritiated leucine using the centrifugation method (Smith and Azam, 1992). Triplicate subsamples and one control of 1.2ml seawater were added to labelled microcentrifuge tubes, with 120 µl of 50% trichloroacetic acid (TCA) added to the controls. The samples and control tubes all received an addition of 40 nM of 3H-Leucine (Perkin-Elmer, specific activity = 150.1 Ci mmol−1), and were then incubated for two hours in the dark in on-deck incubators at in-situ temperature for 20 m depth at that station. The incubations were ended by the addition of 120 µl of 50% TCA to fix the sample, with the samples then stored at -20ºC before processing on land following the procedure outlined in Gasol (1999). All microcentrifuge tubes were vortexed before being spun on a centrifuge for 10 minutes at 12000 g followed by aspiration of the liquid from the sample. The microcentrifuge tubes then had 1 ml of 5% TCA added, before being vortexed and spun for another 10 minutes at 12000 g. The tubes were aspirated for a final time before the addition of 1 ml of scintillation cocktail and a final vortex. From this point the samples were stored in the dark at room temperature. The incorporated radioactivity of each sample was determined by running the tubes on a Tri-Carb® Liquid Scintillation Counter (Perkin-Elmer) with quenching correction. The resulting scintillation values were used to calculate the incorporated Leucine, and from this the bacterial uptake of carbon (Gasol, 1999).

Data and Resources

This dataset has no data

Cite this as

Deans, Fenella, Décima, Moira (2024). Dataset: Bacterioplankton abundance and heterotrophic production from the Chatham Rise, east of New Zealand, measured during the SalpPOOP (TAN1810) campaign onboard the RV Tangaroa. https://doi.org/10.1594/PANGAEA.967249

DOI retrieved:

Additional Info

Field Value
Imported on November 30, 2024
Last update November 30, 2024
License CC-BY-4.0
Source https://doi.pangaea.de/10.1594/PANGAEA.967249
Author Deans, Fenella
Given Name Fenella
Family Name Deans
More Authors
Décima, Moira
Resource Type text/tab-separated-values - filename: TAN1810_Bacteria_Salp_biomass
Subject Areas
Name: BiologicalClassification

Related Identifiers
Title: Influence of salp blooms on bacterioplankton production, diversity, and community composition in the Southern Ocean
Type: DOI
Relation: References
Authors: Deans Fenella , Décima Moira , Gutiérrez-Rodríguez Andrés , Morales Sergio E , Baltar Federico , Law Cliff S , Décima Moira , Gutiérrez-Rodríguez Andrés , Selph Karen E , Safi Karl , Kelly Thomas B , Latasa Mikel , Gorbunov Maxim Y , Décima Moira , Gutiérrez-Rodríguez Andrés , Selph Karen E , Safi Karl , Kelly Thomas B , Latasa Mikel , Gorbunov Maxim Y , Gasol J , Smith David Charles , Azam Farooq .

Title: Phytoplankton net primary production (NPP) and size-fractionated chlorophyll at Chatham Rise, east of New Zealand, measured during the SalpPOOP (TAN1810) campaign onboard the RV Tangaroa
Identifier: https://doi.org/10.1594/PANGAEA.928088
Type: DOI
Relation: References
Year: 2021
Authors: Deans Fenella , Décima Moira , Gutiérrez-Rodríguez Andrés , Morales Sergio E , Baltar Federico , Law Cliff S , Décima Moira , Gutiérrez-Rodríguez Andrés , Selph Karen E , Safi Karl , Kelly Thomas B , Latasa Mikel , Gorbunov Maxim Y , Décima Moira , Gutiérrez-Rodríguez Andrés , Selph Karen E , Safi Karl , Kelly Thomas B , Latasa Mikel , Gorbunov Maxim Y , Gasol J , Smith David Charles , Azam Farooq .

Title: Salp abundance and size-structure at Chatham Rise, east of New Zealand, measured during the SalpPOOP (TAN1810) campaign onboard the RV Tangaroa
Identifier: https://doi.org/10.1594/PANGAEA.928092
Type: DOI
Relation: References
Year: 2021
Authors: Deans Fenella , Décima Moira , Gutiérrez-Rodríguez Andrés , Morales Sergio E , Baltar Federico , Law Cliff S , Décima Moira , Gutiérrez-Rodríguez Andrés , Selph Karen E , Safi Karl , Kelly Thomas B , Latasa Mikel , Gorbunov Maxim Y , Décima Moira , Gutiérrez-Rodríguez Andrés , Selph Karen E , Safi Karl , Kelly Thomas B , Latasa Mikel , Gorbunov Maxim Y , Gasol J , Smith David Charles , Azam Farooq .

Title: How to measure bacterial activity and production with the uptake of radiolabeled leucine
Type: DOI
Relation: References
Year: 1999
Source: The Leucine Handbook
Authors: Deans Fenella , Décima Moira , Gutiérrez-Rodríguez Andrés , Morales Sergio E , Baltar Federico , Law Cliff S , Décima Moira , Gutiérrez-Rodríguez Andrés , Selph Karen E , Safi Karl , Kelly Thomas B , Latasa Mikel , Gorbunov Maxim Y , Décima Moira , Gutiérrez-Rodríguez Andrés , Selph Karen E , Safi Karl , Kelly Thomas B , Latasa Mikel , Gorbunov Maxim Y , Gasol J , Smith David Charles , Azam Farooq .

Title: A simple, economical method for measuring bacterial protein synthesis rates in seawater using 3H-leucine
Type: DOI
Relation: References
Year: 1992
Source: Marine Microbial Food Webs
Authors: Deans Fenella , Décima Moira , Gutiérrez-Rodríguez Andrés , Morales Sergio E , Baltar Federico , Law Cliff S , Décima Moira , Gutiérrez-Rodríguez Andrés , Selph Karen E , Safi Karl , Kelly Thomas B , Latasa Mikel , Gorbunov Maxim Y , Décima Moira , Gutiérrez-Rodríguez Andrés , Selph Karen E , Safi Karl , Kelly Thomas B , Latasa Mikel , Gorbunov Maxim Y , Gasol J , Smith David Charles , Azam Farooq .