Seawater carbonate chemistry and nearshore microbial communities of the Pacific Northwest coasts of Canada and the U.S

A survey of marine pelagic coastal microbial communities was conducted over a large geographic latitude range, from Cape Mendocino in northern California USA to Queen Charlotte Sound in British Columbia Canada, during the spring to summer transition. DNA metabarcoding and flow cytometry were used to characterize microbial communities. This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from NOAA's National Centers for Environmental Information (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-09-14.

Data and Resources

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Cite this as

Rhodes, Linda D, Adams, Nicolaus G, Simon, Ramon Gallego, Kavanaugh, Maria, Alin, Simone R, Feely, Richard A (2024). Dataset: Seawater carbonate chemistry and nearshore microbial communities of the Pacific Northwest coasts of Canada and the U.S. https://doi.org/10.1594/PANGAEA.972609

DOI retrieved: 2024

Additional Info

Field Value
Imported on November 30, 2024
Last update November 30, 2024
License CC-BY-4.0
Source https://doi.org/10.1594/PANGAEA.972609
Author Rhodes, Linda D
Given Name Linda D
Family Name Rhodes
More Authors
Adams, Nicolaus G
Simon, Ramon Gallego
Kavanaugh, Maria
Alin, Simone R
Feely, Richard A
Source Creation 2024
Publication Year 2024
Resource Type text/tab-separated-values - filename: Rhodes-etal_2024_FMS
Subject Areas
Name: BiologicalClassification

Name: Chemistry

Name: Ecology

Related Identifiers
Title: Nearshore microbial communities of the Pacific Northwest coasts of Canada and the U.S
Identifier: https://doi.org/10.3389/fmars.2024.1430930
Type: DOI
Relation: References
Year: 2024
Source: Frontiers in Marine Science
Authors: Rhodes Linda D , Adams Nicolaus G , Simon Ramon Gallego , Kavanaugh Maria , Alin Simone R , Feely Richard A , Alin Simone R , Feely Richard A , Hales Burke , Byrne Robert H , Cochlan William , Liu Xuewu , Greeley Dana , Rhodes Linda D , Adams Nicolaus G , Alin Simone R , Feely Richard A , Nisumaa Anne-Marin , Pesant Stephane , Bellerby Richard G J , Delille Bruno , Middelburg Jack J , Orr James C , Riebesell Ulf , Tyrrell Toby , Wolf-Gladrow Dieter A , Gattuso Jean-Pierre , Gattuso Jean-Pierre , Epitalon Jean-Marie , Lavigne Héloïse , Orr James , Gentili Bernard , Hagens Mathilde , Hofmann Andreas , Mueller Jens-Daniel , Proye Aurélien , Rae James , Soetaert Karline .

Title: Dissolved inorganic carbon, total alkalinity, pH on total scale, and other variables collected from profile and discrete sample observations using CTD, Niskin bottle, and other instruments from NOAA Ship Ronald H. Brown in the U.S. West Coast California Current System from 2016-05-08 to 2016-06-06 (NCEI Accession 0169412)
Identifier: https://doi.org/10.7289/V5V40SHG
Type: DOI
Relation: References
Year: 2017
Source: NOAA National Centers for Environmental Information
Authors: Rhodes Linda D , Adams Nicolaus G , Simon Ramon Gallego , Kavanaugh Maria , Alin Simone R , Feely Richard A , Alin Simone R , Feely Richard A , Hales Burke , Byrne Robert H , Cochlan William , Liu Xuewu , Greeley Dana , Rhodes Linda D , Adams Nicolaus G , Alin Simone R , Feely Richard A , Nisumaa Anne-Marin , Pesant Stephane , Bellerby Richard G J , Delille Bruno , Middelburg Jack J , Orr James C , Riebesell Ulf , Tyrrell Toby , Wolf-Gladrow Dieter A , Gattuso Jean-Pierre , Gattuso Jean-Pierre , Epitalon Jean-Marie , Lavigne Héloïse , Orr James , Gentili Bernard , Hagens Mathilde , Hofmann Andreas , Mueller Jens-Daniel , Proye Aurélien , Rae James , Soetaert Karline .

Title: Cellular abundances of bacterioplankton and eukaryotic picoplankton measured by flow cytometry in water samples collected on NOAA Ship Ronald H. Brown during the West Coast Ocean Acidification Cruise led by the Pacific Marine Environmental Laboratory (PMEL) in the northern California current ecosystem from 2016-05-24 to 2016-06-16 (NCEI Accession 0265154)
Identifier: https://www.ncei.noaa.gov/archive/accession/0265154
Type: DOI
Relation: References
Year: 2022
Source: NOAA National Centers for Environmental Information
Authors: Rhodes Linda D , Adams Nicolaus G , Simon Ramon Gallego , Kavanaugh Maria , Alin Simone R , Feely Richard A , Alin Simone R , Feely Richard A , Hales Burke , Byrne Robert H , Cochlan William , Liu Xuewu , Greeley Dana , Rhodes Linda D , Adams Nicolaus G , Alin Simone R , Feely Richard A , Nisumaa Anne-Marin , Pesant Stephane , Bellerby Richard G J , Delille Bruno , Middelburg Jack J , Orr James C , Riebesell Ulf , Tyrrell Toby , Wolf-Gladrow Dieter A , Gattuso Jean-Pierre , Gattuso Jean-Pierre , Epitalon Jean-Marie , Lavigne Héloïse , Orr James , Gentili Bernard , Hagens Mathilde , Hofmann Andreas , Mueller Jens-Daniel , Proye Aurélien , Rae James , Soetaert Karline .

Title: EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification
Identifier: https://doi.org/10.5194/essd-2-167-2010
Type: DOI
Relation: References
Year: 2010
Source: Earth System Science Data
Authors: Rhodes Linda D , Adams Nicolaus G , Simon Ramon Gallego , Kavanaugh Maria , Alin Simone R , Feely Richard A , Alin Simone R , Feely Richard A , Hales Burke , Byrne Robert H , Cochlan William , Liu Xuewu , Greeley Dana , Rhodes Linda D , Adams Nicolaus G , Alin Simone R , Feely Richard A , Nisumaa Anne-Marin , Pesant Stephane , Bellerby Richard G J , Delille Bruno , Middelburg Jack J , Orr James C , Riebesell Ulf , Tyrrell Toby , Wolf-Gladrow Dieter A , Gattuso Jean-Pierre , Gattuso Jean-Pierre , Epitalon Jean-Marie , Lavigne Héloïse , Orr James , Gentili Bernard , Hagens Mathilde , Hofmann Andreas , Mueller Jens-Daniel , Proye Aurélien , Rae James , Soetaert Karline .

Title: seacarb: seawater carbonate chemistry with R. R package version 3.3.3
Identifier: https://cran.r-project.org/web/packages/seacarb/index.html
Type: DOI
Relation: References
Year: 2024
Authors: Rhodes Linda D , Adams Nicolaus G , Simon Ramon Gallego , Kavanaugh Maria , Alin Simone R , Feely Richard A , Alin Simone R , Feely Richard A , Hales Burke , Byrne Robert H , Cochlan William , Liu Xuewu , Greeley Dana , Rhodes Linda D , Adams Nicolaus G , Alin Simone R , Feely Richard A , Nisumaa Anne-Marin , Pesant Stephane , Bellerby Richard G J , Delille Bruno , Middelburg Jack J , Orr James C , Riebesell Ulf , Tyrrell Toby , Wolf-Gladrow Dieter A , Gattuso Jean-Pierre , Gattuso Jean-Pierre , Epitalon Jean-Marie , Lavigne Héloïse , Orr James , Gentili Bernard , Hagens Mathilde , Hofmann Andreas , Mueller Jens-Daniel , Proye Aurélien , Rae James , Soetaert Karline .