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UniProt dataset

The UniProt dataset is a comprehensive protein dataset. We download reviewed protein sequences (550k) with the limitation of 100 in length as D_r (57k examples). Then we use a community reimplementation of AlphaFold to predict the secondary structure for D_r. After filtering some low-quality examples, we obtain D_s with 46k examples, including both sequence and secondary structure information.

Data and Resources

Cite this as

Huazhong University of Science and Technology, University of California, Santa Barbara, ByteDance Research (2024). Dataset: UniProt dataset. https://doi.org/10.57702/8uwa3mwy

DOI retrieved: December 16, 2024

Additional Info

Field Value
Created December 16, 2024
Last update December 16, 2024
Defined In https://doi.org/10.48550/arXiv.1701.08318
Author Huazhong University of Science and Technology
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University of California, Santa Barbara
ByteDance Research
Homepage https://www.uniprot.org/