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UniProt dataset

The UniProt dataset is a comprehensive protein dataset. We download reviewed protein sequences (550k) with the limitation of 100 in length as D_r (57k examples). Then we use a community reimplementation of AlphaFold to predict the secondary structure for D_r. After filtering some low-quality examples, we obtain D_s with 46k examples, including both sequence and secondary structure information.

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Cite this as

Huazhong University of Science and Technology, University of California, Santa Barbara, ByteDance Research (2024). Dataset: UniProt dataset. https://doi.org/10.57702/8uwa3mwy

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Additional Info

Field	Value
Created	December 16, 2024
Last update	December 16, 2024
Defined In	https://doi.org/10.48550/arXiv.1701.08318
Author	Huazhong University of Science and Technology
More Authors	University of California, Santa Barbara ByteDance Research
Homepage	https://www.uniprot.org/