Changes
On December 2, 2024 at 5:56:27 PM UTC, admin:
-
Changed value of field
doi_status
toTrue
in PDBbind -
Changed value of field
doi_date_published
to2024-12-02
in PDBbind -
Added resource Original Metadata to PDBbind
f | 1 | { | f | 1 | { |
2 | "access_rights": "", | 2 | "access_rights": "", | ||
3 | "author": "Junde Li", | 3 | "author": "Junde Li", | ||
4 | "author_email": "", | 4 | "author_email": "", | ||
5 | "citation": [ | 5 | "citation": [ | ||
6 | "https://doi.org/10.48550/arXiv.2112.12563", | 6 | "https://doi.org/10.48550/arXiv.2112.12563", | ||
7 | "https://doi.org/10.48550/arXiv.2311.18574" | 7 | "https://doi.org/10.48550/arXiv.2311.18574" | ||
8 | ], | 8 | ], | ||
9 | "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700", | 9 | "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700", | ||
10 | "defined_in": "https://doi.org/10.48550/arXiv.2204.12586", | 10 | "defined_in": "https://doi.org/10.48550/arXiv.2204.12586", | ||
11 | "doi": "10.57702/k1e8e089", | 11 | "doi": "10.57702/k1e8e089", | ||
n | 12 | "doi_date_published": null, | n | 12 | "doi_date_published": "2024-12-02", |
13 | "doi_publisher": "TIB", | 13 | "doi_publisher": "TIB", | ||
n | 14 | "doi_status": false, | n | 14 | "doi_status": true, |
15 | "domain": "https://service.tib.eu/ldmservice", | 15 | "domain": "https://service.tib.eu/ldmservice", | ||
16 | "extra_authors": [ | 16 | "extra_authors": [ | ||
17 | { | 17 | { | ||
18 | "extra_author": "Swaroop Ghosh", | 18 | "extra_author": "Swaroop Ghosh", | ||
19 | "orcid": "" | 19 | "orcid": "" | ||
20 | } | 20 | } | ||
21 | ], | 21 | ], | ||
22 | "groups": [ | 22 | "groups": [ | ||
23 | { | 23 | { | ||
24 | "description": "", | 24 | "description": "", | ||
25 | "display_name": "Bioinformatics", | 25 | "display_name": "Bioinformatics", | ||
26 | "id": "8873e69c-aaa7-49c3-9aa0-09c38b25a369", | 26 | "id": "8873e69c-aaa7-49c3-9aa0-09c38b25a369", | ||
27 | "image_display_url": "", | 27 | "image_display_url": "", | ||
28 | "name": "bioinformatics", | 28 | "name": "bioinformatics", | ||
29 | "title": "Bioinformatics" | 29 | "title": "Bioinformatics" | ||
30 | }, | 30 | }, | ||
31 | { | 31 | { | ||
32 | "description": "", | 32 | "description": "", | ||
33 | "display_name": "Chemistry", | 33 | "display_name": "Chemistry", | ||
34 | "id": "c0f36b78-cd17-4792-8301-60807bc5a9ac", | 34 | "id": "c0f36b78-cd17-4792-8301-60807bc5a9ac", | ||
35 | "image_display_url": "", | 35 | "image_display_url": "", | ||
36 | "name": "chemistry", | 36 | "name": "chemistry", | ||
37 | "title": "Chemistry" | 37 | "title": "Chemistry" | ||
38 | }, | 38 | }, | ||
39 | { | 39 | { | ||
40 | "description": "", | 40 | "description": "", | ||
41 | "display_name": "Drug Discovery", | 41 | "display_name": "Drug Discovery", | ||
42 | "id": "36599ef1-90c1-4573-91d8-81b89c49184e", | 42 | "id": "36599ef1-90c1-4573-91d8-81b89c49184e", | ||
43 | "image_display_url": "", | 43 | "image_display_url": "", | ||
44 | "name": "drug-discovery", | 44 | "name": "drug-discovery", | ||
45 | "title": "Drug Discovery" | 45 | "title": "Drug Discovery" | ||
46 | }, | 46 | }, | ||
47 | { | 47 | { | ||
48 | "description": "", | 48 | "description": "", | ||
49 | "display_name": "Molecular Docking", | 49 | "display_name": "Molecular Docking", | ||
50 | "id": "31599798-a839-4a9c-a250-d865b5822c2b", | 50 | "id": "31599798-a839-4a9c-a250-d865b5822c2b", | ||
51 | "image_display_url": "", | 51 | "image_display_url": "", | ||
52 | "name": "molecular-docking", | 52 | "name": "molecular-docking", | ||
53 | "title": "Molecular Docking" | 53 | "title": "Molecular Docking" | ||
54 | }, | 54 | }, | ||
55 | { | 55 | { | ||
56 | "description": "", | 56 | "description": "", | ||
57 | "display_name": "Molecules", | 57 | "display_name": "Molecules", | ||
58 | "id": "37bea1cd-19ae-40e3-8053-be65bd82c3b1", | 58 | "id": "37bea1cd-19ae-40e3-8053-be65bd82c3b1", | ||
59 | "image_display_url": "", | 59 | "image_display_url": "", | ||
60 | "name": "molecules", | 60 | "name": "molecules", | ||
61 | "title": "Molecules" | 61 | "title": "Molecules" | ||
62 | }, | 62 | }, | ||
63 | { | 63 | { | ||
64 | "description": "", | 64 | "description": "", | ||
65 | "display_name": "Protein-ligand complexes", | 65 | "display_name": "Protein-ligand complexes", | ||
66 | "id": "53b5a02b-5f1f-4fe3-a34a-7a9516f0ef1d", | 66 | "id": "53b5a02b-5f1f-4fe3-a34a-7a9516f0ef1d", | ||
67 | "image_display_url": "", | 67 | "image_display_url": "", | ||
68 | "name": "protein-ligand-complexes", | 68 | "name": "protein-ligand-complexes", | ||
69 | "title": "Protein-ligand complexes" | 69 | "title": "Protein-ligand complexes" | ||
70 | } | 70 | } | ||
71 | ], | 71 | ], | ||
72 | "id": "16b45565-d138-44d4-9e02-a9e27c0739fa", | 72 | "id": "16b45565-d138-44d4-9e02-a9e27c0739fa", | ||
73 | "isopen": false, | 73 | "isopen": false, | ||
74 | "landing_page": "https://doi.org/10.1039/C9CC90091F", | 74 | "landing_page": "https://doi.org/10.1039/C9CC90091F", | ||
75 | "license_title": null, | 75 | "license_title": null, | ||
76 | "link_orkg": "", | 76 | "link_orkg": "", | ||
77 | "metadata_created": "2024-12-02T17:56:25.746208", | 77 | "metadata_created": "2024-12-02T17:56:25.746208", | ||
n | 78 | "metadata_modified": "2024-12-02T17:56:25.746213", | n | 78 | "metadata_modified": "2024-12-02T17:56:26.102138", |
79 | "name": "pdbbind", | 79 | "name": "pdbbind", | ||
80 | "notes": "The dataset is used for compound-protein binding affinity | 80 | "notes": "The dataset is used for compound-protein binding affinity | ||
81 | prediction, and it contains 12,699 compound-protein pairs.", | 81 | prediction, and it contains 12,699 compound-protein pairs.", | ||
n | 82 | "num_resources": 0, | n | 82 | "num_resources": 1, |
83 | "num_tags": 9, | 83 | "num_tags": 9, | ||
84 | "organization": { | 84 | "organization": { | ||
85 | "approval_status": "approved", | 85 | "approval_status": "approved", | ||
86 | "created": "2024-11-25T12:11:38.292601", | 86 | "created": "2024-11-25T12:11:38.292601", | ||
87 | "description": "", | 87 | "description": "", | ||
88 | "id": "079d46db-32df-4b48-91f3-0a8bc8f69559", | 88 | "id": "079d46db-32df-4b48-91f3-0a8bc8f69559", | ||
89 | "image_url": "", | 89 | "image_url": "", | ||
90 | "is_organization": true, | 90 | "is_organization": true, | ||
91 | "name": "no-organization", | 91 | "name": "no-organization", | ||
92 | "state": "active", | 92 | "state": "active", | ||
93 | "title": "No Organization", | 93 | "title": "No Organization", | ||
94 | "type": "organization" | 94 | "type": "organization" | ||
95 | }, | 95 | }, | ||
96 | "owner_org": "079d46db-32df-4b48-91f3-0a8bc8f69559", | 96 | "owner_org": "079d46db-32df-4b48-91f3-0a8bc8f69559", | ||
97 | "private": false, | 97 | "private": false, | ||
98 | "relationships_as_object": [], | 98 | "relationships_as_object": [], | ||
99 | "relationships_as_subject": [], | 99 | "relationships_as_subject": [], | ||
t | 100 | "resources": [], | t | 100 | "resources": [ |
101 | { | ||||
102 | "cache_last_updated": null, | ||||
103 | "cache_url": null, | ||||
104 | "created": "2024-12-02T18:38:42", | ||||
105 | "data": [ | ||||
106 | "dcterms:title", | ||||
107 | "dcterms:accessRights", | ||||
108 | "dcterms:creator", | ||||
109 | "dcterms:description", | ||||
110 | "dcterms:issued", | ||||
111 | "dcterms:language", | ||||
112 | "dcterms:identifier", | ||||
113 | "dcat:theme", | ||||
114 | "dcterms:type", | ||||
115 | "dcat:keyword", | ||||
116 | "dcat:landingPage", | ||||
117 | "dcterms:hasVersion", | ||||
118 | "dcterms:format", | ||||
119 | "mls:task", | ||||
120 | "datacite:isDescribedBy" | ||||
121 | ], | ||||
122 | "description": "The json representation of the dataset with its | ||||
123 | distributions based on DCAT.", | ||||
124 | "format": "JSON", | ||||
125 | "hash": "", | ||||
126 | "id": "502214b0-0947-45a8-a3c9-e8d84d407892", | ||||
127 | "last_modified": "2024-12-02T17:56:26.093917", | ||||
128 | "metadata_modified": "2024-12-02T17:56:26.104815", | ||||
129 | "mimetype": "application/json", | ||||
130 | "mimetype_inner": null, | ||||
131 | "name": "Original Metadata", | ||||
132 | "package_id": "16b45565-d138-44d4-9e02-a9e27c0739fa", | ||||
133 | "position": 0, | ||||
134 | "resource_type": null, | ||||
135 | "size": 1117, | ||||
136 | "state": "active", | ||||
137 | "url": | ||||
138 | resource/502214b0-0947-45a8-a3c9-e8d84d407892/download/metadata.json", | ||||
139 | "url_type": "upload" | ||||
140 | } | ||||
141 | ], | ||||
101 | "services_used_list": "", | 142 | "services_used_list": "", | ||
102 | "state": "active", | 143 | "state": "active", | ||
103 | "tags": [ | 144 | "tags": [ | ||
104 | { | 145 | { | ||
105 | "display_name": "Drug discovery", | 146 | "display_name": "Drug discovery", | ||
106 | "id": "8dbbd679-b2f4-44bf-938a-a2571ea3c5db", | 147 | "id": "8dbbd679-b2f4-44bf-938a-a2571ea3c5db", | ||
107 | "name": "Drug discovery", | 148 | "name": "Drug discovery", | ||
108 | "state": "active", | 149 | "state": "active", | ||
109 | "vocabulary_id": null | 150 | "vocabulary_id": null | ||
110 | }, | 151 | }, | ||
111 | { | 152 | { | ||
112 | "display_name": "Molecules", | 153 | "display_name": "Molecules", | ||
113 | "id": "7526901e-8646-4910-89a7-69b416f1477b", | 154 | "id": "7526901e-8646-4910-89a7-69b416f1477b", | ||
114 | "name": "Molecules", | 155 | "name": "Molecules", | ||
115 | "state": "active", | 156 | "state": "active", | ||
116 | "vocabulary_id": null | 157 | "vocabulary_id": null | ||
117 | }, | 158 | }, | ||
118 | { | 159 | { | ||
119 | "display_name": "PDBbind", | 160 | "display_name": "PDBbind", | ||
120 | "id": "de23bfdd-2fab-4893-b578-0be7bd0c3fb8", | 161 | "id": "de23bfdd-2fab-4893-b578-0be7bd0c3fb8", | ||
121 | "name": "PDBbind", | 162 | "name": "PDBbind", | ||
122 | "state": "active", | 163 | "state": "active", | ||
123 | "vocabulary_id": null | 164 | "vocabulary_id": null | ||
124 | }, | 165 | }, | ||
125 | { | 166 | { | ||
126 | "display_name": "Protein-ligand complexes", | 167 | "display_name": "Protein-ligand complexes", | ||
127 | "id": "bb45cce7-1753-43da-9f0e-27f31004b606", | 168 | "id": "bb45cce7-1753-43da-9f0e-27f31004b606", | ||
128 | "name": "Protein-ligand complexes", | 169 | "name": "Protein-ligand complexes", | ||
129 | "state": "active", | 170 | "state": "active", | ||
130 | "vocabulary_id": null | 171 | "vocabulary_id": null | ||
131 | }, | 172 | }, | ||
132 | { | 173 | { | ||
133 | "display_name": "compound-protein binding affinity", | 174 | "display_name": "compound-protein binding affinity", | ||
134 | "id": "23da0098-4b85-4511-9eb1-b25cd387be01", | 175 | "id": "23da0098-4b85-4511-9eb1-b25cd387be01", | ||
135 | "name": "compound-protein binding affinity", | 176 | "name": "compound-protein binding affinity", | ||
136 | "state": "active", | 177 | "state": "active", | ||
137 | "vocabulary_id": null | 178 | "vocabulary_id": null | ||
138 | }, | 179 | }, | ||
139 | { | 180 | { | ||
140 | "display_name": "drug discovery", | 181 | "display_name": "drug discovery", | ||
141 | "id": "c0525e95-673f-4eae-bb86-c67d02d455d4", | 182 | "id": "c0525e95-673f-4eae-bb86-c67d02d455d4", | ||
142 | "name": "drug discovery", | 183 | "name": "drug discovery", | ||
143 | "state": "active", | 184 | "state": "active", | ||
144 | "vocabulary_id": null | 185 | "vocabulary_id": null | ||
145 | }, | 186 | }, | ||
146 | { | 187 | { | ||
147 | "display_name": "molecular docking", | 188 | "display_name": "molecular docking", | ||
148 | "id": "bdae7b57-6fd4-4c51-abfb-6d526948ca32", | 189 | "id": "bdae7b57-6fd4-4c51-abfb-6d526948ca32", | ||
149 | "name": "molecular docking", | 190 | "name": "molecular docking", | ||
150 | "state": "active", | 191 | "state": "active", | ||
151 | "vocabulary_id": null | 192 | "vocabulary_id": null | ||
152 | }, | 193 | }, | ||
153 | { | 194 | { | ||
154 | "display_name": "protein-ligand complexes", | 195 | "display_name": "protein-ligand complexes", | ||
155 | "id": "70ca5562-587f-4f27-93cc-0f389ba8973e", | 196 | "id": "70ca5562-587f-4f27-93cc-0f389ba8973e", | ||
156 | "name": "protein-ligand complexes", | 197 | "name": "protein-ligand complexes", | ||
157 | "state": "active", | 198 | "state": "active", | ||
158 | "vocabulary_id": null | 199 | "vocabulary_id": null | ||
159 | }, | 200 | }, | ||
160 | { | 201 | { | ||
161 | "display_name": "protein-ligand interaction", | 202 | "display_name": "protein-ligand interaction", | ||
162 | "id": "62873485-ff9a-4c12-8192-d7ec515db59d", | 203 | "id": "62873485-ff9a-4c12-8192-d7ec515db59d", | ||
163 | "name": "protein-ligand interaction", | 204 | "name": "protein-ligand interaction", | ||
164 | "state": "active", | 205 | "state": "active", | ||
165 | "vocabulary_id": null | 206 | "vocabulary_id": null | ||
166 | } | 207 | } | ||
167 | ], | 208 | ], | ||
168 | "title": "PDBbind", | 209 | "title": "PDBbind", | ||
169 | "type": "dataset", | 210 | "type": "dataset", | ||
170 | "version": "" | 211 | "version": "" | ||
171 | } | 212 | } |