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On December 2, 2024 at 11:50:01 PM UTC, admin:
-
Added resource Original Metadata to TCGA dataset
f | 1 | { | f | 1 | { |
2 | "access_rights": "", | 2 | "access_rights": "", | ||
3 | "author": "Cameron Dahan", | 3 | "author": "Cameron Dahan", | ||
4 | "author_email": "", | 4 | "author_email": "", | ||
5 | "citation": [ | 5 | "citation": [ | ||
6 | "https://doi.org/10.48550/arXiv.2102.03014" | 6 | "https://doi.org/10.48550/arXiv.2102.03014" | ||
7 | ], | 7 | ], | ||
8 | "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700", | 8 | "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700", | ||
9 | "defined_in": "https://doi.org/10.48550/arXiv.1902.00078", | 9 | "defined_in": "https://doi.org/10.48550/arXiv.1902.00078", | ||
10 | "doi": "10.57702/9lms2alj", | 10 | "doi": "10.57702/9lms2alj", | ||
11 | "doi_date_published": "2024-12-02", | 11 | "doi_date_published": "2024-12-02", | ||
12 | "doi_publisher": "TIB", | 12 | "doi_publisher": "TIB", | ||
13 | "doi_status": true, | 13 | "doi_status": true, | ||
14 | "domain": "https://service.tib.eu/ldmservice", | 14 | "domain": "https://service.tib.eu/ldmservice", | ||
15 | "extra_authors": [ | 15 | "extra_authors": [ | ||
16 | { | 16 | { | ||
17 | "extra_author": "Stergios Christodoulidis", | 17 | "extra_author": "Stergios Christodoulidis", | ||
18 | "orcid": "" | 18 | "orcid": "" | ||
19 | }, | 19 | }, | ||
20 | { | 20 | { | ||
21 | "extra_author": "Maria Vakalopoulou", | 21 | "extra_author": "Maria Vakalopoulou", | ||
22 | "orcid": "" | 22 | "orcid": "" | ||
23 | }, | 23 | }, | ||
24 | { | 24 | { | ||
25 | "extra_author": "Joseph Boyd", | 25 | "extra_author": "Joseph Boyd", | ||
26 | "orcid": "" | 26 | "orcid": "" | ||
27 | } | 27 | } | ||
28 | ], | 28 | ], | ||
29 | "groups": [ | 29 | "groups": [ | ||
30 | { | 30 | { | ||
31 | "description": "", | 31 | "description": "", | ||
32 | "display_name": "Artifacts", | 32 | "display_name": "Artifacts", | ||
33 | "id": "eb159167-d2f8-4edd-8f03-3d88960315c5", | 33 | "id": "eb159167-d2f8-4edd-8f03-3d88960315c5", | ||
34 | "image_display_url": "", | 34 | "image_display_url": "", | ||
35 | "name": "artifacts", | 35 | "name": "artifacts", | ||
36 | "title": "Artifacts" | 36 | "title": "Artifacts" | ||
37 | }, | 37 | }, | ||
38 | { | 38 | { | ||
39 | "description": "", | 39 | "description": "", | ||
40 | "display_name": "Cancer Genomics", | 40 | "display_name": "Cancer Genomics", | ||
41 | "id": "a372c368-4b28-462e-aa06-fca38730712f", | 41 | "id": "a372c368-4b28-462e-aa06-fca38730712f", | ||
42 | "image_display_url": "", | 42 | "image_display_url": "", | ||
43 | "name": "cancer-genomics", | 43 | "name": "cancer-genomics", | ||
44 | "title": "Cancer Genomics" | 44 | "title": "Cancer Genomics" | ||
45 | }, | 45 | }, | ||
46 | { | 46 | { | ||
47 | "description": "", | 47 | "description": "", | ||
48 | "display_name": "Genomic Alterations", | 48 | "display_name": "Genomic Alterations", | ||
49 | "id": "1e88c917-c861-4ea1-a238-1aaa4267dc15", | 49 | "id": "1e88c917-c861-4ea1-a238-1aaa4267dc15", | ||
50 | "image_display_url": "", | 50 | "image_display_url": "", | ||
51 | "name": "genomic-alterations", | 51 | "name": "genomic-alterations", | ||
52 | "title": "Genomic Alterations" | 52 | "title": "Genomic Alterations" | ||
53 | }, | 53 | }, | ||
54 | { | 54 | { | ||
55 | "description": "", | 55 | "description": "", | ||
56 | "display_name": "Histopathology", | 56 | "display_name": "Histopathology", | ||
57 | "id": "82509a4f-474e-4d24-8f98-8a65caaa3b08", | 57 | "id": "82509a4f-474e-4d24-8f98-8a65caaa3b08", | ||
58 | "image_display_url": "", | 58 | "image_display_url": "", | ||
59 | "name": "histopathology", | 59 | "name": "histopathology", | ||
60 | "title": "Histopathology" | 60 | "title": "Histopathology" | ||
61 | } | 61 | } | ||
62 | ], | 62 | ], | ||
63 | "id": "9ca6f002-cd80-4f54-8f27-6f1a3151cfa9", | 63 | "id": "9ca6f002-cd80-4f54-8f27-6f1a3151cfa9", | ||
64 | "isopen": false, | 64 | "isopen": false, | ||
65 | "landing_page": "https://www.cancer.gov/tcga", | 65 | "landing_page": "https://www.cancer.gov/tcga", | ||
66 | "license_title": null, | 66 | "license_title": null, | ||
67 | "link_orkg": "", | 67 | "link_orkg": "", | ||
68 | "metadata_created": "2024-12-02T22:47:05.445595", | 68 | "metadata_created": "2024-12-02T22:47:05.445595", | ||
n | 69 | "metadata_modified": "2024-12-02T23:49:59.743597", | n | 69 | "metadata_modified": "2024-12-02T23:50:00.821010", |
70 | "name": "tcga-dataset", | 70 | "name": "tcga-dataset", | ||
71 | "notes": "The dataset used in this paper is the TCGA dataset, which | 71 | "notes": "The dataset used in this paper is the TCGA dataset, which | ||
72 | contains somatic genomic alterations (SGAs) and differentially | 72 | contains somatic genomic alterations (SGAs) and differentially | ||
73 | expressed genes (DEGs) of 4,468 tumors.", | 73 | expressed genes (DEGs) of 4,468 tumors.", | ||
n | 74 | "num_resources": 0, | n | 74 | "num_resources": 1, |
75 | "num_tags": 8, | 75 | "num_tags": 8, | ||
76 | "organization": { | 76 | "organization": { | ||
77 | "approval_status": "approved", | 77 | "approval_status": "approved", | ||
78 | "created": "2024-11-25T12:11:38.292601", | 78 | "created": "2024-11-25T12:11:38.292601", | ||
79 | "description": "", | 79 | "description": "", | ||
80 | "id": "079d46db-32df-4b48-91f3-0a8bc8f69559", | 80 | "id": "079d46db-32df-4b48-91f3-0a8bc8f69559", | ||
81 | "image_url": "", | 81 | "image_url": "", | ||
82 | "is_organization": true, | 82 | "is_organization": true, | ||
83 | "name": "no-organization", | 83 | "name": "no-organization", | ||
84 | "state": "active", | 84 | "state": "active", | ||
85 | "title": "No Organization", | 85 | "title": "No Organization", | ||
86 | "type": "organization" | 86 | "type": "organization" | ||
87 | }, | 87 | }, | ||
88 | "owner_org": "079d46db-32df-4b48-91f3-0a8bc8f69559", | 88 | "owner_org": "079d46db-32df-4b48-91f3-0a8bc8f69559", | ||
89 | "private": false, | 89 | "private": false, | ||
90 | "relationships_as_object": [], | 90 | "relationships_as_object": [], | ||
91 | "relationships_as_subject": [], | 91 | "relationships_as_subject": [], | ||
t | 92 | "resources": [], | t | 92 | "resources": [ |
93 | { | ||||
94 | "cache_last_updated": null, | ||||
95 | "cache_url": null, | ||||
96 | "created": "2024-12-03T00:20:35", | ||||
97 | "data": [ | ||||
98 | "dcterms:title", | ||||
99 | "dcterms:accessRights", | ||||
100 | "dcterms:creator", | ||||
101 | "dcterms:description", | ||||
102 | "dcterms:issued", | ||||
103 | "dcterms:language", | ||||
104 | "dcterms:identifier", | ||||
105 | "dcat:theme", | ||||
106 | "dcterms:type", | ||||
107 | "dcat:keyword", | ||||
108 | "dcat:landingPage", | ||||
109 | "dcterms:hasVersion", | ||||
110 | "dcterms:format", | ||||
111 | "mls:task", | ||||
112 | "datacite:isDescribedBy" | ||||
113 | ], | ||||
114 | "description": "The json representation of the dataset with its | ||||
115 | distributions based on DCAT.", | ||||
116 | "format": "JSON", | ||||
117 | "hash": "", | ||||
118 | "id": "dd98a719-f509-45ae-a19f-83a9c03a30bd", | ||||
119 | "last_modified": "2024-12-02T23:50:00.813008", | ||||
120 | "metadata_modified": "2024-12-02T23:50:00.824758", | ||||
121 | "mimetype": "application/json", | ||||
122 | "mimetype_inner": null, | ||||
123 | "name": "Original Metadata", | ||||
124 | "package_id": "9ca6f002-cd80-4f54-8f27-6f1a3151cfa9", | ||||
125 | "position": 0, | ||||
126 | "resource_type": null, | ||||
127 | "size": 1102, | ||||
128 | "state": "active", | ||||
129 | "url": | ||||
130 | resource/dd98a719-f509-45ae-a19f-83a9c03a30bd/download/metadata.json", | ||||
131 | "url_type": "upload" | ||||
132 | } | ||||
133 | ], | ||||
93 | "services_used_list": "", | 134 | "services_used_list": "", | ||
94 | "state": "active", | 135 | "state": "active", | ||
95 | "tags": [ | 136 | "tags": [ | ||
96 | { | 137 | { | ||
97 | "display_name": "Cancer Genomics", | 138 | "display_name": "Cancer Genomics", | ||
98 | "id": "eed734bf-91a3-42ed-ab2f-d915e54c581d", | 139 | "id": "eed734bf-91a3-42ed-ab2f-d915e54c581d", | ||
99 | "name": "Cancer Genomics", | 140 | "name": "Cancer Genomics", | ||
100 | "state": "active", | 141 | "state": "active", | ||
101 | "vocabulary_id": null | 142 | "vocabulary_id": null | ||
102 | }, | 143 | }, | ||
103 | { | 144 | { | ||
104 | "display_name": "Differentially Expressed Genes", | 145 | "display_name": "Differentially Expressed Genes", | ||
105 | "id": "b7da6c40-5994-4a58-ba3e-016388850587", | 146 | "id": "b7da6c40-5994-4a58-ba3e-016388850587", | ||
106 | "name": "Differentially Expressed Genes", | 147 | "name": "Differentially Expressed Genes", | ||
107 | "state": "active", | 148 | "state": "active", | ||
108 | "vocabulary_id": null | 149 | "vocabulary_id": null | ||
109 | }, | 150 | }, | ||
110 | { | 151 | { | ||
111 | "display_name": "Multi-Omics Data Integration", | 152 | "display_name": "Multi-Omics Data Integration", | ||
112 | "id": "cb799e77-f418-4d41-8857-26b79c0676b1", | 153 | "id": "cb799e77-f418-4d41-8857-26b79c0676b1", | ||
113 | "name": "Multi-Omics Data Integration", | 154 | "name": "Multi-Omics Data Integration", | ||
114 | "state": "active", | 155 | "state": "active", | ||
115 | "vocabulary_id": null | 156 | "vocabulary_id": null | ||
116 | }, | 157 | }, | ||
117 | { | 158 | { | ||
118 | "display_name": "Somatic Genomic Alterations", | 159 | "display_name": "Somatic Genomic Alterations", | ||
119 | "id": "1a984b7f-56ef-4c29-8096-f8c96d93054a", | 160 | "id": "1a984b7f-56ef-4c29-8096-f8c96d93054a", | ||
120 | "name": "Somatic Genomic Alterations", | 161 | "name": "Somatic Genomic Alterations", | ||
121 | "state": "active", | 162 | "state": "active", | ||
122 | "vocabulary_id": null | 163 | "vocabulary_id": null | ||
123 | }, | 164 | }, | ||
124 | { | 165 | { | ||
125 | "display_name": "TCGA", | 166 | "display_name": "TCGA", | ||
126 | "id": "fd74f999-f4cc-407b-8f7d-29eb14bdb14f", | 167 | "id": "fd74f999-f4cc-407b-8f7d-29eb14bdb14f", | ||
127 | "name": "TCGA", | 168 | "name": "TCGA", | ||
128 | "state": "active", | 169 | "state": "active", | ||
129 | "vocabulary_id": null | 170 | "vocabulary_id": null | ||
130 | }, | 171 | }, | ||
131 | { | 172 | { | ||
132 | "display_name": "artifacts", | 173 | "display_name": "artifacts", | ||
133 | "id": "473f4739-4367-47a8-9d33-9ad93773c808", | 174 | "id": "473f4739-4367-47a8-9d33-9ad93773c808", | ||
134 | "name": "artifacts", | 175 | "name": "artifacts", | ||
135 | "state": "active", | 176 | "state": "active", | ||
136 | "vocabulary_id": null | 177 | "vocabulary_id": null | ||
137 | }, | 178 | }, | ||
138 | { | 179 | { | ||
139 | "display_name": "histopathology", | 180 | "display_name": "histopathology", | ||
140 | "id": "c5bd7bb7-4841-4397-ad31-22482121ef56", | 181 | "id": "c5bd7bb7-4841-4397-ad31-22482121ef56", | ||
141 | "name": "histopathology", | 182 | "name": "histopathology", | ||
142 | "state": "active", | 183 | "state": "active", | ||
143 | "vocabulary_id": null | 184 | "vocabulary_id": null | ||
144 | }, | 185 | }, | ||
145 | { | 186 | { | ||
146 | "display_name": "pan-cancer", | 187 | "display_name": "pan-cancer", | ||
147 | "id": "cb3ae634-6b39-4b15-a36c-d460350f84a1", | 188 | "id": "cb3ae634-6b39-4b15-a36c-d460350f84a1", | ||
148 | "name": "pan-cancer", | 189 | "name": "pan-cancer", | ||
149 | "state": "active", | 190 | "state": "active", | ||
150 | "vocabulary_id": null | 191 | "vocabulary_id": null | ||
151 | } | 192 | } | ||
152 | ], | 193 | ], | ||
153 | "title": "TCGA dataset", | 194 | "title": "TCGA dataset", | ||
154 | "type": "dataset", | 195 | "type": "dataset", | ||
155 | "version": "" | 196 | "version": "" | ||
156 | } | 197 | } |