Changes
On December 2, 2024 at 10:12:45 PM UTC, admin:
-
Changed value of field
doi_status
toTrue
in The Cancer Genome Atlas -
Changed value of field
doi_date_published
to2024-12-02
in The Cancer Genome Atlas -
Added resource Original Metadata to The Cancer Genome Atlas
f | 1 | { | f | 1 | { |
2 | "access_rights": "", | 2 | "access_rights": "", | ||
3 | "author": "Nora K. Speicher", | 3 | "author": "Nora K. Speicher", | ||
4 | "author_email": "", | 4 | "author_email": "", | ||
5 | "citation": [ | 5 | "citation": [ | ||
6 | "https://doi.org/10.48550/arXiv.1811.08102", | 6 | "https://doi.org/10.48550/arXiv.1811.08102", | ||
7 | "https://doi.org/10.48550/arXiv.2102.10553", | 7 | "https://doi.org/10.48550/arXiv.2102.10553", | ||
8 | "https://doi.org/10.48550/arXiv.2107.13247", | 8 | "https://doi.org/10.48550/arXiv.2107.13247", | ||
9 | "https://doi.org/10.48550/arXiv.1504.00826", | 9 | "https://doi.org/10.48550/arXiv.1504.00826", | ||
10 | "https://doi.org/10.48550/arXiv.1704.08544", | 10 | "https://doi.org/10.48550/arXiv.1704.08544", | ||
11 | "https://doi.org/10.48550/arXiv.2407.14709", | 11 | "https://doi.org/10.48550/arXiv.2407.14709", | ||
12 | "https://doi.org/10.48550/arXiv.2311.08199", | 12 | "https://doi.org/10.48550/arXiv.2311.08199", | ||
13 | "https://doi.org/10.48550/arXiv.2212.03273" | 13 | "https://doi.org/10.48550/arXiv.2212.03273" | ||
14 | ], | 14 | ], | ||
15 | "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700", | 15 | "creator_user_id": "17755db4-395a-4b3b-ac09-e8e3484ca700", | ||
16 | "defined_in": "https://doi.org/10.48550/arXiv.2104.12862", | 16 | "defined_in": "https://doi.org/10.48550/arXiv.2104.12862", | ||
17 | "doi": "10.57702/v021r3jg", | 17 | "doi": "10.57702/v021r3jg", | ||
n | 18 | "doi_date_published": null, | n | 18 | "doi_date_published": "2024-12-02", |
19 | "doi_publisher": "TIB", | 19 | "doi_publisher": "TIB", | ||
n | 20 | "doi_status": false, | n | 20 | "doi_status": true, |
21 | "domain": "https://service.tib.eu/ldmservice", | 21 | "domain": "https://service.tib.eu/ldmservice", | ||
22 | "extra_authors": [ | 22 | "extra_authors": [ | ||
23 | { | 23 | { | ||
24 | "extra_author": "Nico Pfeifer", | 24 | "extra_author": "Nico Pfeifer", | ||
25 | "orcid": "" | 25 | "orcid": "" | ||
26 | } | 26 | } | ||
27 | ], | 27 | ], | ||
28 | "groups": [ | 28 | "groups": [ | ||
29 | { | 29 | { | ||
30 | "description": "", | 30 | "description": "", | ||
31 | "display_name": "Breast Cancer", | 31 | "display_name": "Breast Cancer", | ||
32 | "id": "68443d66-b4f8-4588-8c85-8406da00a69c", | 32 | "id": "68443d66-b4f8-4588-8c85-8406da00a69c", | ||
33 | "image_display_url": "", | 33 | "image_display_url": "", | ||
34 | "name": "breast-cancer", | 34 | "name": "breast-cancer", | ||
35 | "title": "Breast Cancer" | 35 | "title": "Breast Cancer" | ||
36 | }, | 36 | }, | ||
37 | { | 37 | { | ||
38 | "description": "", | 38 | "description": "", | ||
39 | "display_name": "Cancer", | 39 | "display_name": "Cancer", | ||
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41 | "image_display_url": "", | 41 | "image_display_url": "", | ||
42 | "name": "cancer", | 42 | "name": "cancer", | ||
43 | "title": "Cancer" | 43 | "title": "Cancer" | ||
44 | }, | 44 | }, | ||
45 | { | 45 | { | ||
46 | "description": "", | 46 | "description": "", | ||
47 | "display_name": "Cancer Genomics", | 47 | "display_name": "Cancer Genomics", | ||
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49 | "image_display_url": "", | 49 | "image_display_url": "", | ||
50 | "name": "cancer-genomics", | 50 | "name": "cancer-genomics", | ||
51 | "title": "Cancer Genomics" | 51 | "title": "Cancer Genomics" | ||
52 | }, | 52 | }, | ||
53 | { | 53 | { | ||
54 | "description": "", | 54 | "description": "", | ||
55 | "display_name": "Cancer Research", | 55 | "display_name": "Cancer Research", | ||
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57 | "image_display_url": "", | 57 | "image_display_url": "", | ||
58 | "name": "cancer-research", | 58 | "name": "cancer-research", | ||
59 | "title": "Cancer Research" | 59 | "title": "Cancer Research" | ||
60 | }, | 60 | }, | ||
61 | { | 61 | { | ||
62 | "description": "", | 62 | "description": "", | ||
63 | "display_name": "Genome Sequencing", | 63 | "display_name": "Genome Sequencing", | ||
64 | "id": "d7825f69-671c-41e4-97ed-d3575f7f53a6", | 64 | "id": "d7825f69-671c-41e4-97ed-d3575f7f53a6", | ||
65 | "image_display_url": "", | 65 | "image_display_url": "", | ||
66 | "name": "genome-sequencing", | 66 | "name": "genome-sequencing", | ||
67 | "title": "Genome Sequencing" | 67 | "title": "Genome Sequencing" | ||
68 | }, | 68 | }, | ||
69 | { | 69 | { | ||
70 | "description": "", | 70 | "description": "", | ||
71 | "display_name": "Genomics", | 71 | "display_name": "Genomics", | ||
72 | "id": "c546e88a-fdf6-4bd9-8814-46a9fa072156", | 72 | "id": "c546e88a-fdf6-4bd9-8814-46a9fa072156", | ||
73 | "image_display_url": "", | 73 | "image_display_url": "", | ||
74 | "name": "genomics", | 74 | "name": "genomics", | ||
75 | "title": "Genomics" | 75 | "title": "Genomics" | ||
76 | }, | 76 | }, | ||
77 | { | 77 | { | ||
78 | "description": "", | 78 | "description": "", | ||
79 | "display_name": "Ovarian Cancer", | 79 | "display_name": "Ovarian Cancer", | ||
80 | "id": "f0c4e286-a8ae-40fe-a261-eef62b732c43", | 80 | "id": "f0c4e286-a8ae-40fe-a261-eef62b732c43", | ||
81 | "image_display_url": "", | 81 | "image_display_url": "", | ||
82 | "name": "ovarian-cancer", | 82 | "name": "ovarian-cancer", | ||
83 | "title": "Ovarian Cancer" | 83 | "title": "Ovarian Cancer" | ||
84 | }, | 84 | }, | ||
85 | { | 85 | { | ||
86 | "description": "", | 86 | "description": "", | ||
87 | "display_name": "Transcriptomics", | 87 | "display_name": "Transcriptomics", | ||
88 | "id": "7c396c2c-a4e2-4dfd-a0c6-d8c33005801b", | 88 | "id": "7c396c2c-a4e2-4dfd-a0c6-d8c33005801b", | ||
89 | "image_display_url": "", | 89 | "image_display_url": "", | ||
90 | "name": "transcriptomics", | 90 | "name": "transcriptomics", | ||
91 | "title": "Transcriptomics" | 91 | "title": "Transcriptomics" | ||
92 | } | 92 | } | ||
93 | ], | 93 | ], | ||
94 | "id": "b07ad991-8802-4aca-853b-731a5f9fda7a", | 94 | "id": "b07ad991-8802-4aca-853b-731a5f9fda7a", | ||
95 | "isopen": false, | 95 | "isopen": false, | ||
96 | "landing_page": "https://xena.ucsc.edu", | 96 | "landing_page": "https://xena.ucsc.edu", | ||
97 | "license_title": null, | 97 | "license_title": null, | ||
98 | "link_orkg": "", | 98 | "link_orkg": "", | ||
99 | "metadata_created": "2024-12-02T22:12:44.060693", | 99 | "metadata_created": "2024-12-02T22:12:44.060693", | ||
n | 100 | "metadata_modified": "2024-12-02T22:12:44.060699", | n | 100 | "metadata_modified": "2024-12-02T22:12:44.715584", |
101 | "name": "the-cancer-genome-atlas", | 101 | "name": "the-cancer-genome-atlas", | ||
102 | "notes": "The TCGA-HN cohort is a publicly available dataset which | 102 | "notes": "The TCGA-HN cohort is a publicly available dataset which | ||
103 | comprises 450 diagnostic H&E WSI of squamous cell carcinoma (SCC) | 103 | comprises 450 diagnostic H&E WSI of squamous cell carcinoma (SCC) | ||
104 | cases from different sites of the head and neck (H&N).", | 104 | cases from different sites of the head and neck (H&N).", | ||
n | 105 | "num_resources": 0, | n | 105 | "num_resources": 1, |
106 | "num_tags": 23, | 106 | "num_tags": 23, | ||
107 | "organization": { | 107 | "organization": { | ||
108 | "approval_status": "approved", | 108 | "approval_status": "approved", | ||
109 | "created": "2024-11-25T12:11:38.292601", | 109 | "created": "2024-11-25T12:11:38.292601", | ||
110 | "description": "", | 110 | "description": "", | ||
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112 | "image_url": "", | 112 | "image_url": "", | ||
113 | "is_organization": true, | 113 | "is_organization": true, | ||
114 | "name": "no-organization", | 114 | "name": "no-organization", | ||
115 | "state": "active", | 115 | "state": "active", | ||
116 | "title": "No Organization", | 116 | "title": "No Organization", | ||
117 | "type": "organization" | 117 | "type": "organization" | ||
118 | }, | 118 | }, | ||
119 | "owner_org": "079d46db-32df-4b48-91f3-0a8bc8f69559", | 119 | "owner_org": "079d46db-32df-4b48-91f3-0a8bc8f69559", | ||
120 | "private": false, | 120 | "private": false, | ||
121 | "relationships_as_object": [], | 121 | "relationships_as_object": [], | ||
122 | "relationships_as_subject": [], | 122 | "relationships_as_subject": [], | ||
t | 123 | "resources": [], | t | 123 | "resources": [ |
124 | { | ||||
125 | "cache_last_updated": null, | ||||
126 | "cache_url": null, | ||||
127 | "created": "2024-12-02T22:29:38", | ||||
128 | "data": [ | ||||
129 | "dcterms:title", | ||||
130 | "dcterms:accessRights", | ||||
131 | "dcterms:creator", | ||||
132 | "dcterms:description", | ||||
133 | "dcterms:issued", | ||||
134 | "dcterms:language", | ||||
135 | "dcterms:identifier", | ||||
136 | "dcat:theme", | ||||
137 | "dcterms:type", | ||||
138 | "dcat:keyword", | ||||
139 | "dcat:landingPage", | ||||
140 | "dcterms:hasVersion", | ||||
141 | "dcterms:format", | ||||
142 | "mls:task", | ||||
143 | "datacite:isDescribedBy" | ||||
144 | ], | ||||
145 | "description": "The json representation of the dataset with its | ||||
146 | distributions based on DCAT.", | ||||
147 | "format": "JSON", | ||||
148 | "hash": "", | ||||
149 | "id": "e04540c2-fba9-469b-9e40-99d67ca2ae53", | ||||
150 | "last_modified": "2024-12-02T22:12:44.704870", | ||||
151 | "metadata_modified": "2024-12-02T22:12:44.718298", | ||||
152 | "mimetype": "application/json", | ||||
153 | "mimetype_inner": null, | ||||
154 | "name": "Original Metadata", | ||||
155 | "package_id": "b07ad991-8802-4aca-853b-731a5f9fda7a", | ||||
156 | "position": 0, | ||||
157 | "resource_type": null, | ||||
158 | "size": 1662, | ||||
159 | "state": "active", | ||||
160 | "url": | ||||
161 | resource/e04540c2-fba9-469b-9e40-99d67ca2ae53/download/metadata.json", | ||||
162 | "url_type": "upload" | ||||
163 | } | ||||
164 | ], | ||||
124 | "services_used_list": "", | 165 | "services_used_list": "", | ||
125 | "state": "active", | 166 | "state": "active", | ||
126 | "tags": [ | 167 | "tags": [ | ||
127 | { | 168 | { | ||
128 | "display_name": "Breast Cancer", | 169 | "display_name": "Breast Cancer", | ||
129 | "id": "da1fcea7-e8aa-442e-9a1f-b2a51dfa4525", | 170 | "id": "da1fcea7-e8aa-442e-9a1f-b2a51dfa4525", | ||
130 | "name": "Breast Cancer", | 171 | "name": "Breast Cancer", | ||
131 | "state": "active", | 172 | "state": "active", | ||
132 | "vocabulary_id": null | 173 | "vocabulary_id": null | ||
133 | }, | 174 | }, | ||
134 | { | 175 | { | ||
135 | "display_name": "Cancer Genomics", | 176 | "display_name": "Cancer Genomics", | ||
136 | "id": "eed734bf-91a3-42ed-ab2f-d915e54c581d", | 177 | "id": "eed734bf-91a3-42ed-ab2f-d915e54c581d", | ||
137 | "name": "Cancer Genomics", | 178 | "name": "Cancer Genomics", | ||
138 | "state": "active", | 179 | "state": "active", | ||
139 | "vocabulary_id": null | 180 | "vocabulary_id": null | ||
140 | }, | 181 | }, | ||
141 | { | 182 | { | ||
142 | "display_name": "Copy number variations", | 183 | "display_name": "Copy number variations", | ||
143 | "id": "28eff622-8ea4-4f45-aa3c-8ad3ca23a669", | 184 | "id": "28eff622-8ea4-4f45-aa3c-8ad3ca23a669", | ||
144 | "name": "Copy number variations", | 185 | "name": "Copy number variations", | ||
145 | "state": "active", | 186 | "state": "active", | ||
146 | "vocabulary_id": null | 187 | "vocabulary_id": null | ||
147 | }, | 188 | }, | ||
148 | { | 189 | { | ||
149 | "display_name": "DNA methylation", | 190 | "display_name": "DNA methylation", | ||
150 | "id": "e126f20c-5049-4096-ab79-be14f66bc261", | 191 | "id": "e126f20c-5049-4096-ab79-be14f66bc261", | ||
151 | "name": "DNA methylation", | 192 | "name": "DNA methylation", | ||
152 | "state": "active", | 193 | "state": "active", | ||
153 | "vocabulary_id": null | 194 | "vocabulary_id": null | ||
154 | }, | 195 | }, | ||
155 | { | 196 | { | ||
156 | "display_name": "Gene expression", | 197 | "display_name": "Gene expression", | ||
157 | "id": "3a375555-3006-42b2-83a8-aaabc86cb913", | 198 | "id": "3a375555-3006-42b2-83a8-aaabc86cb913", | ||
158 | "name": "Gene expression", | 199 | "name": "Gene expression", | ||
159 | "state": "active", | 200 | "state": "active", | ||
160 | "vocabulary_id": null | 201 | "vocabulary_id": null | ||
161 | }, | 202 | }, | ||
162 | { | 203 | { | ||
163 | "display_name": "Genomic Alterations", | 204 | "display_name": "Genomic Alterations", | ||
164 | "id": "ee172e15-6a7a-409a-8429-28757f34f6be", | 205 | "id": "ee172e15-6a7a-409a-8429-28757f34f6be", | ||
165 | "name": "Genomic Alterations", | 206 | "name": "Genomic Alterations", | ||
166 | "state": "active", | 207 | "state": "active", | ||
167 | "vocabulary_id": null | 208 | "vocabulary_id": null | ||
168 | }, | 209 | }, | ||
169 | { | 210 | { | ||
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173 | "state": "active", | 214 | "state": "active", | ||
174 | "vocabulary_id": null | 215 | "vocabulary_id": null | ||
175 | }, | 216 | }, | ||
176 | { | 217 | { | ||
177 | "display_name": "Head and Neck Cancer", | 218 | "display_name": "Head and Neck Cancer", | ||
178 | "id": "28ecc3ef-7f1b-42e8-b908-0a4187dcadc1", | 219 | "id": "28ecc3ef-7f1b-42e8-b908-0a4187dcadc1", | ||
179 | "name": "Head and Neck Cancer", | 220 | "name": "Head and Neck Cancer", | ||
180 | "state": "active", | 221 | "state": "active", | ||
181 | "vocabulary_id": null | 222 | "vocabulary_id": null | ||
182 | }, | 223 | }, | ||
183 | { | 224 | { | ||
184 | "display_name": "Ovarian Cancer", | 225 | "display_name": "Ovarian Cancer", | ||
185 | "id": "3dfab914-50cd-40c6-a39d-38d194696c5c", | 226 | "id": "3dfab914-50cd-40c6-a39d-38d194696c5c", | ||
186 | "name": "Ovarian Cancer", | 227 | "name": "Ovarian Cancer", | ||
187 | "state": "active", | 228 | "state": "active", | ||
188 | "vocabulary_id": null | 229 | "vocabulary_id": null | ||
189 | }, | 230 | }, | ||
190 | { | 231 | { | ||
191 | "display_name": "TCGA-HN", | 232 | "display_name": "TCGA-HN", | ||
192 | "id": "27ff8676-c05a-408a-8c6d-3bc5696b8e59", | 233 | "id": "27ff8676-c05a-408a-8c6d-3bc5696b8e59", | ||
193 | "name": "TCGA-HN", | 234 | "name": "TCGA-HN", | ||
194 | "state": "active", | 235 | "state": "active", | ||
195 | "vocabulary_id": null | 236 | "vocabulary_id": null | ||
196 | }, | 237 | }, | ||
197 | { | 238 | { | ||
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199 | "id": "ee3593ed-ade8-493b-934e-2a6d509cef17", | 240 | "id": "ee3593ed-ade8-493b-934e-2a6d509cef17", | ||
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201 | "state": "active", | 242 | "state": "active", | ||
202 | "vocabulary_id": null | 243 | "vocabulary_id": null | ||
203 | }, | 244 | }, | ||
204 | { | 245 | { | ||
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206 | "id": "db95defa-8c78-4bca-9927-858cbe060aa7", | 247 | "id": "db95defa-8c78-4bca-9927-858cbe060aa7", | ||
207 | "name": "cancer genomics", | 248 | "name": "cancer genomics", | ||
208 | "state": "active", | 249 | "state": "active", | ||
209 | "vocabulary_id": null | 250 | "vocabulary_id": null | ||
210 | }, | 251 | }, | ||
211 | { | 252 | { | ||
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216 | "vocabulary_id": null | 257 | "vocabulary_id": null | ||
217 | }, | 258 | }, | ||
218 | { | 259 | { | ||
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220 | "id": "7b472399-e948-480e-8692-af33b4feab99", | 261 | "id": "7b472399-e948-480e-8692-af33b4feab99", | ||
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222 | "state": "active", | 263 | "state": "active", | ||
223 | "vocabulary_id": null | 264 | "vocabulary_id": null | ||
224 | }, | 265 | }, | ||
225 | { | 266 | { | ||
226 | "display_name": "genome sequencing", | 267 | "display_name": "genome sequencing", | ||
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231 | }, | 272 | }, | ||
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236 | "state": "active", | 277 | "state": "active", | ||
237 | "vocabulary_id": null | 278 | "vocabulary_id": null | ||
238 | }, | 279 | }, | ||
239 | { | 280 | { | ||
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244 | "vocabulary_id": null | 285 | "vocabulary_id": null | ||
245 | }, | 286 | }, | ||
246 | { | 287 | { | ||
247 | "display_name": "miRNA expression", | 288 | "display_name": "miRNA expression", | ||
248 | "id": "1ae7fca9-018b-4b73-aa80-46db421e163e", | 289 | "id": "1ae7fca9-018b-4b73-aa80-46db421e163e", | ||
249 | "name": "miRNA expression", | 290 | "name": "miRNA expression", | ||
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252 | }, | 293 | }, | ||
253 | { | 294 | { | ||
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258 | "vocabulary_id": null | 299 | "vocabulary_id": null | ||
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260 | { | 301 | { | ||
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263 | "name": "proteomics", | 304 | "name": "proteomics", | ||
264 | "state": "active", | 305 | "state": "active", | ||
265 | "vocabulary_id": null | 306 | "vocabulary_id": null | ||
266 | }, | 307 | }, | ||
267 | { | 308 | { | ||
268 | "display_name": "somatic point mutations", | 309 | "display_name": "somatic point mutations", | ||
269 | "id": "2ebeacc2-0188-4823-8b56-bb408a5a8bea", | 310 | "id": "2ebeacc2-0188-4823-8b56-bb408a5a8bea", | ||
270 | "name": "somatic point mutations", | 311 | "name": "somatic point mutations", | ||
271 | "state": "active", | 312 | "state": "active", | ||
272 | "vocabulary_id": null | 313 | "vocabulary_id": null | ||
273 | }, | 314 | }, | ||
274 | { | 315 | { | ||
275 | "display_name": "transcriptomics", | 316 | "display_name": "transcriptomics", | ||
276 | "id": "dba849aa-1370-4184-b8bb-85c3f6490a4a", | 317 | "id": "dba849aa-1370-4184-b8bb-85c3f6490a4a", | ||
277 | "name": "transcriptomics", | 318 | "name": "transcriptomics", | ||
278 | "state": "active", | 319 | "state": "active", | ||
279 | "vocabulary_id": null | 320 | "vocabulary_id": null | ||
280 | }, | 321 | }, | ||
281 | { | 322 | { | ||
282 | "display_name": "whole slide images", | 323 | "display_name": "whole slide images", | ||
283 | "id": "39c355c7-65d0-4794-8eea-b349a52d3a14", | 324 | "id": "39c355c7-65d0-4794-8eea-b349a52d3a14", | ||
284 | "name": "whole slide images", | 325 | "name": "whole slide images", | ||
285 | "state": "active", | 326 | "state": "active", | ||
286 | "vocabulary_id": null | 327 | "vocabulary_id": null | ||
287 | } | 328 | } | ||
288 | ], | 329 | ], | ||
289 | "title": "The Cancer Genome Atlas", | 330 | "title": "The Cancer Genome Atlas", | ||
290 | "type": "dataset", | 331 | "type": "dataset", | ||
291 | "version": "" | 332 | "version": "" | ||
292 | } | 333 | } |